Gene Information

Name : VC0395_0141 (VC0395_0141)
Accession : YP_001214982.1
Strain :
Genome accession: NC_009456
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 165083 - 166591 bp
Length : 1509 bp
Strand : -
Note : identified by match to protein family HMM PF00884; match to protein family HMM PF08019

DNA sequence :
TTGGGGATTCGCCCTCTCTATTCCGTTATTTTTCCTGTTTGCACTGAATTTTATCTTCCAGATTTTCAGTTGGCCTTACT
TGTTCAAGCCTTTTTTGCTGTGTTACTTGTGCTGTCGGCCTTAATCAGCTTCGCTGGCTTTCAATACGGTGTGATTGTCG
ATCAAGATATGTTAGTGAATGTGTTGGAAACCGACCGCGGCGAAGCGGGATCTTATCTCACAATCTACTCTGTACTTTGG
TTGCTCGGGTTTGGCCTCGTGCCTGCGCTAGCTCTGCTTTTTACCCCAATCCGCCCAGAAAAAAGTGCCCTGCGTTTTTT
GATGAAAAAGGGGCTATCCATGCTGGTTTCCGTTGTCGTGATTGGCGTGATCGCTGGGCTTTATTATCAGAATTACTCGT
CCGTTGGACGCAACAACAGCTCACTCAAAAAAATGATCATCCCGACCCATTTTCTCTACAGCAGTTTTGGGTTAGTCAAA
CAGCGCTATTTCACGGAACCAATGGTGTATCAGGAGATCGGTCAGGATGCGCAGCAAAAGCCAAGCGCCGTTCGTCAGGC
AACCCAAAAGCCGACCTTAGTGTTTTTTGTGTTAGGTGAAACTGCACGAGTACAAAACTACCAATACTTGGGTTATCCGC
GTGATACCAATGCTTATACCGCCCCTTTCCAGCCGATCTTTTTTAAAGATGTGGCGAGTTGCGGTACAGCAACCGCCGTT
TCAGTGCCTTGTATGTTCTCCAACATGAATCGCCAAAATTTTGATCGCTCTCGGGCGGACAACCAAGACAATGTGCTGGA
TATTCTGCAGCGTGCGGGCATCAGTCTGCTCTGGAAGGAAAATGACGGTGGCGATAAAAATGTCGCGAAGAATATCCCGC
TTAAAGAGTTAGCTAGAGATAACCGAGAAGGGATTTGCGATGGCGACACCTGTTACGACATTGCGATGTTAGAGAATTTA
GATCAGGAGATCGCCACGCAGCAGGGCAACCGAATGATTTTCATGCATTTCATCGGTAGCCACGGCCCCACTTACTTTAA
ACGTTACCCAAAAGAGATGGCAGTTTACCAGCCTGACTGCCCAAGAGCAGATATTGAAAACTGTAGCGTCGAGCAGATCG
TAAACACGTATGACAACACCATTCGCTACAGCGACTATGTGATGTCGCAGCTCCTCGCTAAGCTCGATTCACTGCAAGAC
CGATATAATACCGCGCTGATTTATATCTCCGATCATGGTGAATCATTAGGTGAAAATGGCCTGTTTTTGCATGGTATGCC
CTATAGCCTAGCGCCTGAGTACCAGACTCGAGTCCCTCTCCTTATCTGGATGTCCTCTGGGTTTAGCCAAAGTAAAGGGA
TTGATGTTGAATGCCTGCGCAGCAACAGTGAATTACCTTATGCGCACCAGAATCTGTTTCACTCACTGCTCGGCGTGATG
GATGTATCAACCAAAGCGTACCAAGCCAATTTGGATCTGTTTGCGAAGTGTAGAACCAGCCAATCTTAG

Protein sequence :
MGIRPLYSVIFPVCTEFYLPDFQLALLVQAFFAVLLVLSALISFAGFQYGVIVDQDMLVNVLETDRGEAGSYLTIYSVLW
LLGFGLVPALALLFTPIRPEKSALRFLMKKGLSMLVSVVVIGVIAGLYYQNYSSVGRNNSSLKKMIIPTHFLYSSFGLVK
QRYFTEPMVYQEIGQDAQQKPSAVRQATQKPTLVFFVLGETARVQNYQYLGYPRDTNAYTAPFQPIFFKDVASCGTATAV
SVPCMFSNMNRQNFDRSRADNQDNVLDILQRAGISLLWKENDGGDKNVAKNIPLKELARDNREGICDGDTCYDIAMLENL
DQEIATQQGNRMIFMHFIGSHGPTYFKRYPKEMAVYQPDCPRADIENCSVEQIVNTYDNTIRYSDYVMSQLLAKLDSLQD
RYNTALIYISDHGESLGENGLFLHGMPYSLAPEYQTRVPLLIWMSSGFSQSKGIDVECLRSNSELPYAHQNLFHSLLGVM
DVSTKAYQANLDLFAKCRTSQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 2e-101 47
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 2e-101 47