Gene Information

Name : VC0395_1098 (VC0395_1098)
Accession : YP_001215934.1
Strain :
Genome accession: NC_009456
Putative virulence/resistance : Unknown
Product : NupC family protein
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 1063150 - 1064358 bp
Length : 1209 bp
Strand : -
Note : identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670; match to protein family HMM TIGR00804

DNA sequence :
ATGGCGATTTTGTTTGGAATCATCGGTGTTACGGTACTGATCTTATGCGCGTATCTGCTCTCTGAAAGCCGCAGTGCGAT
TAATTGGAAAACCATTTCCCGAGCCTTGTTGTTGCAAATTGGTTTTGCGGCTCTTGTGCTTTATTTCCCATTGGGGCAAA
CCGCGCTAAGCAGCTTGAGTAATGGGGTTTCTGGTTTGCTCGGTTTTGCCGATGTCGGCATTCGCTTTCTGTTTGGTGAT
CTTGCCGATACGGGCTTTATTTTTGCTGTTCGTGTATTACCTATCATCATCTTCTTCAGTGCGCTGATTTCTGCCCTTTA
TTACCTCGGTGTGATGCAAAAAGTGATCGCCCTGATCGGCGGTGGCATTCAACGCTTCTTAGGCACCAGTAAGGCGGAAT
CACTGGTCGCGACAGGCAATATTTTCCTATCACAAGGCGAATCGCCACTTTTGGTGCGCCCCTTCCTTGCCAATATGACA
CGCTCCGAACTGTTTGCGGTCATGGCGGGCGGTATGGCATCGATAGCAGGCTCAGTGCTGGGGGGTTACGCAGGTTTAGG
GGTTGAGCTGAAATACTTGATTGCAGCGAGTTTCATGGCGGCGCCGGGCAGTTTAATGATGGCGAAAATCATTGTTCCTG
AGCGTGGTGTGCCAATCGATCAAAGCCAAGTCGAGTTGGATAAAGCGCAAGACAGCAACTTGATTGATGCTCTCGCTAGC
GGTGCAATGAATGGTATGAAAGTCGCCGTTGCAGTGGGCACTATGTTGATTGCGTTCGTCAGCGTGATCGCTATGGTCAA
CACTGGCCTTGAAAATCTGGGCGATCTGGTTGGGTTTAGCGGCATTACCTTACAAGCCATGTTCGGTTATCTGTTTGCTC
CACTGGCATGGGTGATTGGCATTCCAAGTCACGAAGTGCTGGCGGCAGGTTCCTACATCGGTCAGAAAGTGGTGATGAAC
GAATTTGTCGCTTTCATTGACTTTGTTGAGCATAAAGCGCTGCTTTCTGAGCATAGCCAAGTCATCATCACGTTTGCATT
GTGTGGCTTTGCCAACATTGGCTCTATCGCGATCCAATTGGGCTCCATTGGCGTGATAGCCCCTGAGCGCCGCTCGGAAG
TGGCGAACCTAGGCATTAAAGCGGTCATTGCTGGCACTTTAGCCAACCTAATGAGCGCTTGCTTAGCGGGGATTTTCATC
TCGCTATAA

Protein sequence :
MAILFGIIGVTVLILCAYLLSESRSAINWKTISRALLLQIGFAALVLYFPLGQTALSSLSNGVSGLLGFADVGIRFLFGD
LADTGFIFAVRVLPIIIFFSALISALYYLGVMQKVIALIGGGIQRFLGTSKAESLVATGNIFLSQGESPLLVRPFLANMT
RSELFAVMAGGMASIAGSVLGGYAGLGVELKYLIAASFMAAPGSLMMAKIIVPERGVPIDQSQVELDKAQDSNLIDALAS
GAMNGMKVAVAVGTMLIAFVSVIAMVNTGLENLGDLVGFSGITLQAMFGYLFAPLAWVIGIPSHEVLAAGSYIGQKVVMN
EFVAFIDFVEHKALLSEHSQVIITFALCGFANIGSIAIQLGSIGVIAPERRSEVANLGIKAVIAGTLANLMSACLAGIFI
SL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 1e-78 48