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Name : VC0395_1057 (VC0395_1057) Accession : YP_001215893.1 Strain : Genome accession: NC_009456 Putative virulence/resistance : Unknown Product : terminase Function : - COG functional category : S : Function unknown COG ID : COG5484 EC number : - Position : 1030342 - 1032159 bp Length : 1818 bp Strand : + Note : identified by match to protein family HMM PF03237; match to protein family HMM PF06056 DNA sequence : ATGGCATACTCTCCCGAAATCCGACAAGCCGCCCGAGCCCTCTATTTGAAGGCATGGACGCCACGCGAAATCGCCGACGA ATTGAATCTGAACAGTGACCGAATTATTTACTACTGGGCGGATAAGTTTGGTTGGCGCGATATGTTGCGTGAACAAACGA TTGATGAAGCTATCGCGAATCGTATTCAAACGCTGCTTGAGGTAGAGAACCCAAGTAAACCGCAGTTGGATATGCTCGAT CGGCTGATTAATCATCACGTCAAACTTAAGAAGCTGCGCGCTACTGAGCAACCGACTCAGCCCAATGAAGCTGGTACAGT TTCGGCGCAAAGTGGTGCACATAGTAGCAAAAGTGGTTCACCTAAGGCCGAATCTGGCACACAAACGGGCGATTCTGGTA AACAATCTGCGCCCAGTGGTAAACGTAAGAAAGTTAAGAATGATGTTAGTGAGATCACCGAGGCCGATTTTAAGCTGTGG CATGACTCGCTGTTTGCCTATCAGCACACGATGCGTAACAACCTGCACCAGCGGACACGTAACATTCTCAAGTCTCGCCA AATTGGCGCAACCTATTACTTTGCAGGTGAAGCGTTAGAACAGGCGATTCTCACGGGCGATAACCAGATATTTCTCTCAG CCTCTCGCGCTCAAGCTGATGTTTTCCGTCGCTATATTGTGGCGATTGCAAAAGAGTTTTTAGGCATTGAGATCACGGGT AACCCTTCTACTTTGTCGAATGGTGCAGAGTTGCACTATCTCTCTACCAACGGCAAAACTGCACAGAGTTACCACGGCCA CGTTTATATTGATGAGTATTTCTGGATCGGCAAGTTTGACGAGCTGAACAAAGTCGCCTCGGCGATGGCTACGCATAAAA AGTGGCGTAAGACTTACTTTTCCACCCCTTCTTCTAAGATGCACCCTGCTTACCCGTTCTGGACGGGTGAAAAATGGCGC GGCGATAAAACCACTCGGAAAAATATTGAGTTCCCGACCTTTGATGAACTGCGCGATGGCGGTCGCTTGTGCCCTGATCG CCAGTGGCGTTATGTGGTTACGATTGAGGATGCCGCTAAGGGTGGCTGTGACCTCTTTGATATTGAGGAACTGCGCGAAG AGTACAGCGAGACGGACTTCAACAACTTGTTTATGTGCGTGTTTGTTGATGGTGCCAGCTCGATATTTGAATTTAATAAG ATTGAACGCTGCATGGTGGATAGCGAGATTTGGCAGGACTTCAAGCCAAACGCTGCTCGCCCATTTGGTAGCCGTGAGGT GTGGTTAGGCTATGACCCATCACGAACCCGTGATAATGCGGTGCTGATGGTGGTCGCGCCACCGATTGTGGCGGTTGAGA AATTCCGTGTGCTTGAGAAACACACTTGGCGCGGGCTTTCTTTCCAACATCAGGCTTCTGAGATCAGCAAAGTGTTTGAG CGCTTCAATGTGACTTACCTTGGCATTGATATCACCGGCATTGGCGCGGGTGTTCATGACTTGCTGGTTAATAAGCACCC TCGCGAAACGGTGGCAATTCACTATTCGAACGAAAATAAAAACCGCTTGGTGATGAAGATGATCGACATCATTGACGGCA ACCGCCTGCAGTTTGATGCGGGCATGAAAGAAACGGCAATGGCGTTTATGGCGATTAAGCGTGTCGCCACGAACAGCGGC AACATGATGACCTTTAAGGCCGAACGTAGCGAGCAAGCTGGCCACGCTGACGACTTTTGGGCTCTTTCTCACGCGCTGAT TAATGAACCCCTCGATCACTCCACTCAACGCAAATCAACATGGCAGATGGCAGCATGA Protein sequence : MAYSPEIRQAARALYLKAWTPREIADELNLNSDRIIYYWADKFGWRDMLREQTIDEAIANRIQTLLEVENPSKPQLDMLD RLINHHVKLKKLRATEQPTQPNEAGTVSAQSGAHSSKSGSPKAESGTQTGDSGKQSAPSGKRKKVKNDVSEITEADFKLW HDSLFAYQHTMRNNLHQRTRNILKSRQIGATYYFAGEALEQAILTGDNQIFLSASRAQADVFRRYIVAIAKEFLGIEITG NPSTLSNGAELHYLSTNGKTAQSYHGHVYIDEYFWIGKFDELNKVASAMATHKKWRKTYFSTPSSKMHPAYPFWTGEKWR GDKTTRKNIEFPTFDELRDGGRLCPDRQWRYVVTIEDAAKGGCDLFDIEELREEYSETDFNNLFMCVFVDGASSIFEFNK IERCMVDSEIWQDFKPNAARPFGSREVWLGYDPSRTRDNAVLMVVAPPIVAVEKFRVLEKHTWRGLSFQHQASEISKVFE RFNVTYLGIDITGIGAGVHDLLVNKHPRETVAIHYSNENKNRLVMKMIDIIDGNRLQFDAGMKETAMAFMAIKRVATNSG NMMTFKAERSEQAGHADDFWALSHALINEPLDHSTQRKSTWQMAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4627 | NP_458709.1 | probable terminase subunit | Not tested | SPI-7 | Protein | 2e-110 | 47 |
| t4322 | NP_807916.1 | terminase subunit | Not tested | SPI-7 | Protein | 1e-110 | 47 |
| unnamed | ABR13464.1 | predicted ATPase terminase subunit | Not tested | PAGI-6 | Protein | 4e-113 | 45 |
