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Name : DehaBAV1_0885 (DehaBAV1_0885) Accession : YP_001214345.1 Strain : Dehalococcoides sp. BAV1 Genome accession: NC_009455 Putative virulence/resistance : Unknown Product : transcription antitermination protein nusG Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 872664 - 873197 bp Length : 534 bp Strand : - Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein DNA sequence : ATGACTGTTAAACAGAAGAACTGGTATGTGGTGCATACCTATTCAGGGCATGAGGAAAGAGTCCGTAAAGGTCTTGAAGA ACGGATTAAATCCATGGATGCCGAGGATGATATAGAGCGGGTTGTACTGCCTACCGAAGAAGAAGTTGAAGTCAAAAACG GTCAGCGGCGAACTATCCGGAAAAAAATACTGCCCGGCTATGTGCTGGTGCAGATGAACATGAACGATAAAAGCTGGACT ATAGTCCGCAATACTCCCGGCGTTACCGGTTTTGTAGGCTCTGAGGGCAAACCCACCAATTTGCCGCCCGAAGAAGTCAG CCGTATTCTGGACCAAATGGAAGCTGAATCACCAAGGGTTAAGGTGGGTTTCCGCAAAGGACAGAGTGTCAGGGTTATTG ACGGACCGTTCGTTGATTTTATTGGCATGGTAGACGAAATTAACACTGAAAAAGGCAAAGTCAAGGTGCTTCTTTCCCTG TTCGGGCGGGAAACACCTGTTGAACTTGACTTTTTGCAGGTCGAAAAGCTCTAG Protein sequence : MTVKQKNWYVVHTYSGHEERVRKGLEERIKSMDAEDDIERVVLPTEEEVEVKNGQRRTIRKKILPGYVLVQMNMNDKSWT IVRNTPGVTGFVGSEGKPTNLPPEEVSRILDQMEAESPRVKVGFRKGQSVRVIDGPFVDFIGMVDEINTEKGKVKVLLSL FGRETPVELDFLQVEKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 1e-36 | 45 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 1e-36 | 45 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 2e-29 | 44 |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 3e-31 | 42 |
