Gene Information

Name : DehaBAV1_0651 (DehaBAV1_0651)
Accession : YP_001214114.1
Strain : Dehalococcoides sp. BAV1
Genome accession: NC_009455
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 640032 - 640955 bp
Length : 924 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerC; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein

DNA sequence :
ATGCAGGAGAATTTTAACAAATACCTTGAATATCTATCGGTAGAAAAAAACGTTTCACCTTATACCCTTAGAAACTACCG
CACAGATTTAATTGGTTTTGTTAATTACCTGATTGAAAAAAAAGTAAGCTCTTTTGACAGGGTTGACCGCTATATCCTGA
GGGATTACATGTCCAGCCTGATAGCCAAAGGAATTGTAAAGGGCAGTATTGCCCGTAAACTTTCGGCAGTACGTTCATTT
TACCGTTATCTTATGCGGGAAGGCCTTATTCAAAAAAACCCCACCTTAAATGCCTCCAGCCCCCGTCTGGACAAACGCCT
GCCGGAGTTTCTGACCGTAACCGAGGTTAACAAACTTCTGCGGGTGCCAGATTCCTCCACCCCCCAAGGACTACGTGACA
AAGCTTTTATGGAACTCCTTTACGCCAGCGGCCTGCGTGTCAGCGAGCTGGTTAAACTGGATATAGAAAATATGGATCTG
CACAGCCACCAGATACGTGTTTGGGGTAAAGGGTCTAAAGAACGCGTAGTTCTAGCGGGCTTACCTGCCATCCAGTCCAT
TCAAAACTATCTCAATCTAGGCAGACCTTTGTTAAAAGGCAAACGGAATACCCCGGCCTTATTCCTGAACCCAACCGGCG
GCAGACTGAGTGCCCGCAGTTTTCAGGAAAGGCTGGATAAACTGGCCAAACAGGCAGGCATTGAAAAACACGTCCATCCG
CATATGCTGCGCCACACTTTTGCTACTCACCTGCTGGACGGAGGAGCAGACCTTCGAGTGGTACAGGAACTTCTGGGGCA
TTCTAACCTTTCCACTACCCAGATATATACCCATGTTACCAAAAGCCAAGCCCGTAAAGTCTACATGTCCAGTCATCCGC
TGGCCAGACCACAGAATAATATCGCCGGGAGGGAAGACGAATGA

Protein sequence :
MQENFNKYLEYLSVEKNVSPYTLRNYRTDLIGFVNYLIEKKVSSFDRVDRYILRDYMSSLIAKGIVKGSIARKLSAVRSF
YRYLMREGLIQKNPTLNASSPRLDKRLPEFLTVTEVNKLLRVPDSSTPQGLRDKAFMELLYASGLRVSELVKLDIENMDL
HSHQIRVWGKGSKERVVLAGLPAIQSIQNYLNLGRPLLKGKRNTPALFLNPTGGRLSARSFQERLDKLAKQAGIEKHVHP
HMLRHTFATHLLDGGADLRVVQELLGHSNLSTTQIYTHVTKSQARKVYMSSHPLARPQNNIAGREDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-42 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-42 43