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Name : DehaBAV1_0550 (DehaBAV1_0550) Accession : YP_001214013.1 Strain : Dehalococcoides sp. BAV1 Genome accession: NC_009455 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 537223 - 538464 bp Length : 1242 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATTTGAAATTTATAAGAGAAAATCCTGAACTGGTACGCAAGGCAGTGGCAGACCGGAATACCGATGCCCCCAT TGATGAAATACTGGAACTGGATAACAGCCGCCGTAACCTCACTCAGGAATTGGATAACCTTCGTGCCAAACGCAAAATAA TGGCCAAACAGAGGGATGAGACCGCCATTGAAGAGGGGCGGGTTTTACGCGGGCAGATAAGTACACTTGAGTCCGAACTT TCACAGGTAGATGAAAAGCTGACTGACCGATTGCTCAGAGTACCCAATATTCCTGACCCGTCTGTGCCTGTTGGCAAAGA TGAAAGCGAAAATGTAGTCCTTTATTACAGGGGAGAAAAACGCAATTTCAGTTTCACTCCCAAACCTCATTGGGAACTGG GTGAAGCCCTGGATATTATAGACTTTGACCGGGGTATCAAACTTTCGGGTTCACGTTTCTATATCTTGAAAGGCGCGGGT GCCCGCCTTCAAAGAGCCCTTATTGCCTTTATGTTAGACCTGCATACCCGAAAGCATGATTATACCGAGATCTACCCCCC CTATATGATAAAAAGAGAGTGTCTGGTAGCTTCGGGCAACCTGCCCAAATTTGCTGACAATCTCTATCATGACGCAGAGG AAGACTACTGGTGGGTGCCTACCGCTGAAGCCCCCTTAACCAATCTGCACCGTGATGAAATACTCTCCGCAGAGCAGTTG CCCATTCATTATGTAGCCTACACCGCCTGTTTCCGCCGTGAGAAAATGTCCGCCGGCAAGGATGTACGCGGCATTAAGCG GCTGCATCAGTTTGACAAGGTTGAACTCTATAAATACTGCAAACCGGAAGATTCTTTTGCCGAACTGGAAAAGATGGTGG CAGATGCGGAAGAAATAGCAGACGCCCTCAAAATACCCTACCGCCTTAAACAGCTGGTCACCGCTGATATAAGCTTCGGT TCAGCCAAGTCTTATGATATTGAAATGTATTCACCCGGAGTTGACGAATGGCTGGAGGTTTCATCCTGTTCCAATTGCAC AGACTTTCAGGGCAGGCGGGCTAATGTCCGCTTCCGCCGCACCTCCGAAGCCAAACCCGAATTCGTCCACACCCTGAACG GCTCCGGTCTGGCCTTGCCTAGAGTGATGATATCGGTTATAGAAAACTACCAGCAACCGGACGGAAGCATTGTAATTCCT GAAGTACTCCGCCCGTTTATGGGAGTGGACGTTATCCGCTAG Protein sequence : MLDLKFIRENPELVRKAVADRNTDAPIDEILELDNSRRNLTQELDNLRAKRKIMAKQRDETAIEEGRVLRGQISTLESEL SQVDEKLTDRLLRVPNIPDPSVPVGKDESENVVLYYRGEKRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGAG ARLQRALIAFMLDLHTRKHDYTEIYPPYMIKRECLVASGNLPKFADNLYHDAEEDYWWVPTAEAPLTNLHRDEILSAEQL PIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFAELEKMVADAEEIADALKIPYRLKQLVTADISFG SAKSYDIEMYSPGVDEWLEVSSCSNCTDFQGRRANVRFRRTSEAKPEFVHTLNGSGLALPRVMISVIENYQQPDGSIVIP EVLRPFMGVDVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-93 | 46 |
