|
Name : DehaBAV1_1301 (DehaBAV1_1301) Accession : YP_001214758.1 Strain : Dehalococcoides sp. BAV1 Genome accession: NC_009455 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1270368 - 1271063 bp Length : 696 bp Strand : + Note : PFAM: Integrase, catalytic region DNA sequence : GTGGCTGATATCATTGAACTGGCTAGTAAGTACGGCAGGTATGGTTATCGGCGAATCACAGCGTTACTCAATGAAAGAGG CTGGAGAGTGAACCATAAAAGAGTAGAGAGAATTTGGCGTACCGAGGGACTCAGGGTGCCCAAGAAGCAGCCCAAGCGGA GTCGGCTATGGCTCAATGACGGTTCGTGCATCAGACTAAGACCGGAGCGTAAGAATCATGTCTGGAGTTATGATTTTGTC ACTGCCAGAACCGCTGACGGCCGGGCTTTCCGGATGCTTAATATCATCGATGAATATACTCGTGAGTGTCTAGCCATAAC GATCAACCGGCGATTGACTTCAGAAGACGTCATAGACCAACTCTTTAATCTATTCATTTTTAGGGGTATCCCGGAACATA TAAGGTCAGACAACGGACCCGAATTTACCGCCAAAGCAATACGCAAGTGGTTGACCCGACTTGGCATCAAGACTCTTTTC ATCGAACCCGGCTCTCCTTGGGAGAATGGCTACATTGAATCATTCAACGGCAAACTGCGAGATGAATTATTGAACTTGGA GATCTTTACTACGCTTGCTGAAGCTCGGGTATTGATTACTGACTGGAGGAGGCAGTACAATCAAGTCCGGCCTCACAGCT CTCTTGGTTATCGTCCTCCAGCACCGGAGGCAATAATGGCAGTGGTAACTACTTAA Protein sequence : MADIIELASKYGRYGYRRITALLNERGWRVNHKRVERIWRTEGLRVPKKQPKRSRLWLNDGSCIRLRPERKNHVWSYDFV TARTADGRAFRMLNIIDEYTRECLAITINRRLTSEDVIDQLFNLFIFRGIPEHIRSDNGPEFTAKAIRKWLTRLGIKTLF IEPGSPWENGYIESFNGKLRDELLNLEIFTTLAEARVLITDWRRQYNQVRPHSSLGYRPPAPEAIMAVVTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 6e-34 | 43 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 1e-28 | 42 |
