Gene Information

Name : DehaBAV1_1149 (DehaBAV1_1149)
Accession : YP_001214606.1
Strain : Dehalococcoides sp. BAV1
Genome accession: NC_009455
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1127306 - 1127515 bp
Length : 210 bp
Strand : +
Note : PFAM: helix-turn-helix domain protein

DNA sequence :
ATGCAAAATAAACTTAAGGTTTTAAGAGCTATAAACAGCCTCACTCAGGAAGAACTGGCAGACAAACTGGGCATTACCCG
CCAGACAGTTATTTCTATAGAACGGGGTAAGTATTCCCCTTCTCTGGAGCTGGCTTTCAAAATAGCCTCCCTTTTTAAAA
CACCTATAGAAGAAATATTTGTATATAACACTGAACAGGAAGGGCAATGA

Protein sequence :
MQNKLKVLRAINSLTQEELADKLGITRQTVISIERGKYSPSLELAFKIASLFKTPIEEIFVYNTEQEGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 9e-10 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 6e-10 48
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 5e-10 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DehaBAV1_1149 YP_001214606.1 XRE family transcriptional regulator VFG2175 Protein 3e-10 48
DehaBAV1_1149 YP_001214606.1 XRE family transcriptional regulator VFG2168 Protein 3e-10 48