Gene Information

Name : DehaBAV1_0115 (DehaBAV1_0115)
Accession : YP_001213584.1
Strain : Dehalococcoides sp. BAV1
Genome accession: NC_009455
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 114986 - 115681 bp
Length : 696 bp
Strand : -
Note : PFAM: Integrase, catalytic region

DNA sequence : 
GTGGCTGATATCATTGAACTGGCTAGTAAGTACGGCAGGTATGGTTATCGGCGAATCACAGCGTTACTCAATGAAAGAGG
CTGGAGAGTGAACCATAAAAGAGTAGAGAGAATTTGGCGTACCGAGGGACTCAGGGTGCCCAAGAAGCAGCCCAAGCGGA
GTCGGCTATGGCTCAATGACGGTTCGTGCATCAGACTAAGACCGGAGCGTAAGAATCATGTCTGGAGTTATGATTTTGTC
ACTGCCAGAACCGCTGACGGCCGGGCTTTCCGGATGCTTAATATCATCGATGAATATACTCGTGAGTGTCTAGCCATAAC
GATCAACCGGCGATTGACTTCAGAAGACGTCATAGACCAACTCTTTAATCTATTCATTTTTAGGGGTATCCCGGAACATA
TAAGGTCAGACAACGGACCCGAATTTACCGCCAAAGCAATACGCAAGTGGTTGACCCGACTTGGCATCAAGACTCTTTTC
ATCGAACCCGGCTCTCCTTGGGAGAATGGCTACATTGAATCATTCAACGGCAAACTGCGAGATGAATTATTGAACTTGGA
GATCTTTACTACGCTTGCTGAAGCTCGGGTATTGATTACTGACTGGAGGAGGCAGTACAATCAAGTCCGGCCTCACAGCT
CTCTTGGTTATCGTCCTCCAGCACCGGAGGCAATAATGGCAGTGGTAACTACTTAA

Protein sequence : 
MADIIELASKYGRYGYRRITALLNERGWRVNHKRVERIWRTEGLRVPKKQPKRSRLWLNDGSCIRLRPERKNHVWSYDFV
TARTADGRAFRMLNIIDEYTRECLAITINRRLTSEDVIDQLFNLFIFRGIPEHIRSDNGPEFTAKAIRKWLTRLGIKTLF
IEPGSPWENGYIESFNGKLRDELLNLEIFTTLAEARVLITDWRRQYNQVRPHSSLGYRPPAPEAIMAVVTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 6e-34 43
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-28 42