Gene Information

Name : DnaB (PTH_2885)
Accession : YP_001213435.1
Strain : Pelotomaculum thermopropionicum SI
Genome accession: NC_009454
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 2988859 - 2990190 bp
Length : 1332 bp
Strand : -
Note : -

DNA sequence :
TTGCTGGAACGGATTCCACCGCAGAACATCGACGCCGAGCAGTCGGTGCTCGGCGCCATTCTTCTTGACCGGGAAGCCAT
TTATAAGGTCTTGAGAATTCTCAAGCCCGAGGATTTTTACCGGGAAAGCCATAAGGTAATTTACGAGGCCATGCTTTCTC
TCAATGAGAGCGGCCGGCCGGTGGATCTGATTACGGTTAGCGAAAGACTCCGGCAGCAGGGCGATCTGGAAAAGGCCGGA
GGGGTGGCCTATATTGCCTCGCTGGCGGAGATGGTTCCCACCGCTGCCAACGTGGAATATTACGCCCGCATTGTCGAGGA
AAAATCGCTCCTGCGCACCCTGATCCAGCTTTCCACCCGCCTGGCCGGCAGGGGCTACGAGGAGGGCGAGGAACCGGAAA
AGCTTATAGCCGAGGCCGAGCAGATGCTCATGGAGCTCGGCAGCCGGCGGGCGGCAGCCGCCCTTTACTCGATCAAGGAC
ATCTTCCTGGAGACGTTCAAGCACCTGGAGTTTCTTTACAACAACCGGGGCAGCATAACCGGGGTGCCGACCCCCTTCAG
CGACCTGGACCGGATCTGCTGCGGGCTTCAGCCCAGCGACCTGATCATTATTGCCGGGCGCCCCAGCATGGGCAAGACCA
GCCTGGGGCTGTGCATCGGCTACAGCGCTGCCTTAAAGCACAACATTCCGGTGGCCATATTCAGCCTGGAAATGTCCAAA
GAGCAACTGGTGCAGCGGATTCTTTGCGCCGAGGCAATGGTGGACCAGCACCGGATCCGCACCGGGGAACTGGACGAAGA
TGACTGGCAGAAGCTGCACGAGACTGCCGGAAAGCTGGCCAAAGCGCCCATTTACATCGACGATACCGCCGCCATCACCG
TTCGCCAGGTGCGGGCCAAGGCCAGGCAACTCCAGGCCGAAAAGGGGCTGGGCCTGATCGTGATCGACTACCTGCAACTG
ATGCAGGGCAGCCGCCGGCCGGAAAACCGCCAGCAGGAGATTTCCGAAATATCCCGCTCCCTGAAGGGCCTGGCCAAGGA
GCTGAACGTGCCGGTCCTGGCGCTGGCGCAGCTCAGCCGGTCGGTGGAGCAGCGCCCGAACAAAAGGCCGGTCATGTCAG
ACCTGCGCGAGTCCGGGTCGCTGGAGCAGGATGCCGATTTGATCATGTTTATTTACCGGGACGAGTATTACAACCGGGAT
TCCGACAAGAAGGGCATAGCTGAAATCATCATCTCCAAGCACCGCAACGGCCCGGTGGGGGTCGTCGAGCTCGGCTTTTT
AAAAGAATTTACCAAATTTGTTCCTCTTATAAAAAACATGGAAGAGGGCTGA

Protein sequence :
MLERIPPQNIDAEQSVLGAILLDREAIYKVLRILKPEDFYRESHKVIYEAMLSLNESGRPVDLITVSERLRQQGDLEKAG
GVAYIASLAEMVPTAANVEYYARIVEEKSLLRTLIQLSTRLAGRGYEEGEEPEKLIAEAEQMLMELGSRRAAAALYSIKD
IFLETFKHLEFLYNNRGSITGVPTPFSDLDRICCGLQPSDLIIIAGRPSMGKTSLGLCIGYSAALKHNIPVAIFSLEMSK
EQLVQRILCAEAMVDQHRIRTGELDEDDWQKLHETAGKLAKAPIYIDDTAAITVRQVRAKARQLQAEKGLGLIVIDYLQL
MQGSRRPENRQQEISEISRSLKGLAKELNVPVLALAQLSRSVEQRPNKRPVMSDLRESGSLEQDADLIMFIYRDEYYNRD
SDKKGIAEIIISKHRNGPVGVVELGFLKEFTKFVPLIKNMEEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-76 47
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 3e-77 43
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 3e-71 43
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-67 43
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-67 43
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-63 42
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-78 41
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 9e-78 41
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-74 41