Gene Information

Name : OmpR (PTH_1831)
Accession : YP_001212381.1
Strain : Pelotomaculum thermopropionicum SI
Genome accession: NC_009454
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1918901 - 1919620 bp
Length : 720 bp
Strand : -
Note : consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCCCAAGATACTTGTAGTGGACGATGAAAAGAACATCCTAGAGCTGGTCCGTTTTAACCTGGAGCGGGAGGGCTACCA
GGTGCTGACCGCCCTGGACGGCCCCCAGGGGCTTGAGCTTGCCCGGGCAGAGAGGCCGGATTTGATCGTTCTTGACGTCA
TGCTGCCAGGCATGAACGGCCTTGAGGTCTGCCGCGAAATGCACCGGGATGCTGCAACCAAAAATATTCCGGTGATTATG
CTGAGCGCCCGGGCAGAAGAACTGGACCGGGTTCTGGGGCTGGAAATGGGTGCCGATGATTACATCACCAAGCCTTTCAG
CCCGCGGGAATTGGTGGCCAGGATTAAGGCCAGACTGCGCCGGATCCAAAAAGAGGAAGGACGGGAAAGGGAAGCCGTGC
CCGGGGGGCGCCTGGACTTCGGCCGGCTGGTTATTGACGAGGAAAAGTTTGCCGTTTATGTGGACGGGGTGAAGGTGGAC
CTTACCCCAAAAGAATTCGAACTGCTGCGTTTCCTGGCCCGCCAGCCCGGCAGGGTATTTTCGCGGGAGCAGCTTTTGGA
ACAGGTCTGGGGTTATGATTATGCAGGCGACTCCCGTACGGTTGACGTTCACATCAGGCACATCAGGCAGAAACTCGGGC
GCCTTTCCGAGAGCGACCAGCCCATTGAGACGGTGCGCGGGGTTGGATACTGCTTTAGGGAGGTGCGCATAGTTTGGTAA

Protein sequence : 
MPKILVVDDEKNILELVRFNLEREGYQVLTALDGPQGLELARAERPDLIVLDVMLPGMNGLEVCREMHRDAATKNIPVIM
LSARAEELDRVLGLEMGADDYITKPFSPRELVARIKARLRRIQKEEGREREAVPGGRLDFGRLVIDEEKFAVYVDGVKVD
LTPKEFELLRFLARQPGRVFSREQLLEQVWGYDYAGDSRTVDVHIRHIRQKLGRLSESDQPIETVRGVGYCFREVRIVW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-40 46
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-40 45
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-31 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OmpR YP_001212381.1 response regulator HE999704.1.gene2815. Protein 2e-56 54
OmpR YP_001212381.1 response regulator NC_003923.1003749.p0 Protein 3e-54 52
OmpR YP_001212381.1 response regulator NC_002952.2859905.p0 Protein 4e-54 51
OmpR YP_001212381.1 response regulator NC_002951.3237708.p0 Protein 3e-54 51
OmpR YP_001212381.1 response regulator NC_002758.1121668.p0 Protein 3e-54 51
OmpR YP_001212381.1 response regulator NC_009641.5332272.p0 Protein 3e-54 51
OmpR YP_001212381.1 response regulator NC_013450.8614421.p0 Protein 3e-54 51
OmpR YP_001212381.1 response regulator NC_007793.3914279.p0 Protein 3e-54 51
OmpR YP_001212381.1 response regulator NC_007622.3794472.p0 Protein 4e-54 51
OmpR YP_001212381.1 response regulator NC_002745.1124361.p0 Protein 3e-54 51
OmpR YP_001212381.1 response regulator NC_009782.5559369.p0 Protein 3e-54 51
OmpR YP_001212381.1 response regulator NC_012469.1.7685629. Protein 2e-50 50
OmpR YP_001212381.1 response regulator AE016830.1.gene1681. Protein 1e-54 49
OmpR YP_001212381.1 response regulator AE000516.2.gene3505. Protein 2e-41 47
OmpR YP_001212381.1 response regulator NC_012469.1.7686381. Protein 5e-50 45
OmpR YP_001212381.1 response regulator FJ349556.1.orf0.gene Protein 3e-46 45
OmpR YP_001212381.1 response regulator CP000034.1.gene2186. Protein 2e-40 45
OmpR YP_001212381.1 response regulator NC_002695.1.916589.p Protein 2e-40 45
OmpR YP_001212381.1 response regulator BAC0039 Protein 2e-40 45
OmpR YP_001212381.1 response regulator AF155139.2.orf0.gene Protein 9e-44 44
OmpR YP_001212381.1 response regulator CP001138.1.gene2239. Protein 4e-39 44
OmpR YP_001212381.1 response regulator CP001918.1.gene3444. Protein 3e-39 44
OmpR YP_001212381.1 response regulator CP000647.1.gene2531. Protein 5e-39 44
OmpR YP_001212381.1 response regulator BAC0596 Protein 4e-39 44
OmpR YP_001212381.1 response regulator NC_002952.2859858.p0 Protein 3e-41 43
OmpR YP_001212381.1 response regulator NC_007622.3794948.p0 Protein 3e-41 43
OmpR YP_001212381.1 response regulator NC_003923.1003417.p0 Protein 3e-41 43
OmpR YP_001212381.1 response regulator NC_013450.8614146.p0 Protein 3e-41 43
OmpR YP_001212381.1 response regulator NC_002951.3238224.p0 Protein 3e-41 43
OmpR YP_001212381.1 response regulator NC_007793.3914065.p0 Protein 3e-41 43
OmpR YP_001212381.1 response regulator NC_002758.1121390.p0 Protein 3e-41 43
OmpR YP_001212381.1 response regulator NC_010079.5776364.p0 Protein 3e-41 43
OmpR YP_001212381.1 response regulator CP004022.1.gene3215. Protein 5e-36 43
OmpR YP_001212381.1 response regulator CP001138.1.gene4273. Protein 1e-32 43
OmpR YP_001212381.1 response regulator CP001918.1.gene5135. Protein 1e-28 43
OmpR YP_001212381.1 response regulator AE015929.1.gene1106. Protein 2e-37 42
OmpR YP_001212381.1 response regulator HE999704.1.gene1528. Protein 7e-36 42
OmpR YP_001212381.1 response regulator CP000034.1.gene3834. Protein 7e-33 42
OmpR YP_001212381.1 response regulator CP000647.1.gene4257. Protein 5e-33 42
OmpR YP_001212381.1 response regulator NC_002695.1.915041.p Protein 7e-33 42
OmpR YP_001212381.1 response regulator BAC0533 Protein 5e-33 42
OmpR YP_001212381.1 response regulator CP000675.2.gene1535. Protein 2e-35 41
OmpR YP_001212381.1 response regulator BAC0197 Protein 2e-27 41
OmpR YP_001212381.1 response regulator NC_005054.2598277.p0 Protein 3e-39 41
OmpR YP_001212381.1 response regulator NC_014475.1.orf0.gen Protein 3e-39 41
OmpR YP_001212381.1 response regulator AF162694.1.orf4.gene Protein 2e-33 41
OmpR YP_001212381.1 response regulator DQ212986.1.gene4.p01 Protein 8e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OmpR YP_001212381.1 response regulator VFG1702 Protein 1e-40 46
OmpR YP_001212381.1 response regulator VFG1563 Protein 4e-40 45
OmpR YP_001212381.1 response regulator VFG1389 Protein 2e-34 45
OmpR YP_001212381.1 response regulator VFG0596 Protein 9e-32 42
OmpR YP_001212381.1 response regulator VFG1386 Protein 7e-42 42