Gene Information

Name : rplS (PTH_1718)
Accession : YP_001212268.1
Strain : Pelotomaculum thermopropionicum SI
Genome accession: NC_009454
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 1806386 - 1806727 bp
Length : 342 bp
Strand : -
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
GTGAACCTCATCCACTCACTTGAACAGGAACAGGCCAAAAAGAATATTGTTAAGTTTGGCCCCGGCGATACCGTACGAGT
GCATGTTAAGGTTGTTGAGGGCGGCCGGGAAAGAATCCAGGTTTTTGAAGGCGTTGTAATCAGGCGCAGAGGCGGTGGCT
TGAGCGAAACTTTTACCGTTCGCAGGGTCTCTTACGGGGTAGGGGTTGAAAGGACATTTCCGCTTCATTCCCCCAGGATT
GAACGTATAGAGGTTGTCAGAAAGGGCAAGGTTCGCCGGGCACGGTTGTACTACCTGCGCGGACTGCGGGGCAAGGCTGC
CCGAATTCAAGATAAGAGGTAG

Protein sequence :
MNLIHSLEQEQAKKNIVKFGPGDTVRVHVKVVEGGRERIQVFEGVVIRRRGGGLSETFTVRRVSYGVGVERTFPLHSPRI
ERIEVVRKGKVRRARLYYLRGLRGKAARIQDKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 1e-25 67
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 4e-17 57