|
Name : PTH_1388 (PTH_1388) Accession : YP_001211938.1 Strain : Pelotomaculum thermopropionicum SI Genome accession: NC_009454 Putative virulence/resistance : Unknown Product : transposase and inactivated derivatives Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 1439796 - 1441025 bp Length : 1230 bp Strand : - Note : - DNA sequence : ATGGCTCAATATCAGATTACCGTAAATCAGGAACTTTTGCACCAACTATTTTTAAGTAATAACAAAGATTCCGGTATAGC AGCCCTGCTGGAATCCGTATTGAACCAGATTTTACAGGCTCAAGCCACCGAGCAGCTTCAAGCCGGGCCATACGAACGCA CCGATGAAAGAAAGGGATATCGCAACGGCACATACCCGCACCAACTGACAACCCGGGTAGGAACCATAACCTTAAGAGTA CCGCGTTTCCGCAACGGTCAGTTTTCCACCGAAATGTTCGCCCGGTACCAGCGCAGCGAACAGGCCCTGGTGCTGACCCT GATGGAAATGGTAATCAACGGGGTCTCTACCCGAAAAATCAGCCAGATCACAGAAGAACTGTGTGGCGCCGAATTTTCCA AGTCCACTGTCTCAGACTTATGCAAGAAACTGGACCCGCTGGTTATCTCTTGGAATAACCGGGACTTGCGGGAAATGCGC TACCCTTTTATATTGGTAGACGCTTTGGTGCTCAAAGTTCGTGAAGATGGGCGCGTCCGCTCCCGGGGTGTCATGATCGC CATCGGCCTAAACACCGAAGGATACCGGGAAGTTTTAGGCATTATGCTTGGCGACAGTGAATCCGAAGCCAGTTGGAGCG AATTTTTCTCTTGGCTTAAAAACCGTAACCTGCGCGGTGTCGACCTGGTAGTGTCAGATGACCATAGCGGTTTGGTAAAG GCTGTTCGCAATCACTTCCAGGGAGTTACCTGGCAACGCTGCCAGACCCACTTTATGCGTAATATCATGGACTCTGCGCC CAAATCTGTAAAGGAAGAACTTTACCCGCGCTTGAGGGCCATTTTGGATGCTCCGGATATCGGCAGCGCCCGGCTATTAT TGAACCAAACCCTGGAGGCATTTGAGAAAAAGGCGCCTAGGGCCATGCGGGTACTTGAAATGGGCTTTGATGATGCTACG GCAGTGCTTGTACTACCGGAAAAATATCGCCTCCGGCTGCGCACTACAAACGGTGTTGAGCGCCTGATCGAAGAAGTCCG GCGCCGGGAACGTGTCATTCGCATTTTCCCGAACAGAGAATCGGTAGTTCGTTTAATCGGAGCTTTACTCATGGAAATCG ACGACAAGTGGGCAGCCGGTAAAAAGTATCTAGATATGGCCGAGTATCTTCAGTGGCAAAAGGAACAAAAACATGACCGT CATCAAAACAATGTTGCTTATATCCGGTAA Protein sequence : MAQYQITVNQELLHQLFLSNNKDSGIAALLESVLNQILQAQATEQLQAGPYERTDERKGYRNGTYPHQLTTRVGTITLRV PRFRNGQFSTEMFARYQRSEQALVLTLMEMVINGVSTRKISQITEELCGAEFSKSTVSDLCKKLDPLVISWNNRDLREMR YPFILVDALVLKVREDGRVRSRGVMIAIGLNTEGYREVLGIMLGDSESEASWSEFFSWLKNRNLRGVDLVVSDDHSGLVK AVRNHFQGVTWQRCQTHFMRNIMDSAPKSVKEELYPRLRAILDAPDIGSARLLLNQTLEAFEKKAPRAMRVLEMGFDDAT AVLVLPEKYRLRLRTTNGVERLIEEVRRRERVIRIFPNRESVVRLIGALLMEIDDKWAAGKKYLDMAEYLQWQKEQKHDR HQNNVAYIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAC67572.1 | transposase for insertion sequence element IS256 in transposon Tn4001 | Not tested | Type-IVc SCCmec | Protein | 1e-65 | 45 |
| unnamed | BAC67574.1 | transposase for insertion sequence element IS256 in transposon Tn4001 | Not tested | Type-IVc SCCmec | Protein | 1e-65 | 45 |
| EF0529 | NP_814305.1 | IS256, transposase | Not tested | Not named | Protein | 2e-65 | 45 |
| SERP1584 | YP_189149.1 | IS256-like transposase | Not tested | ¥ÕSP¥â | Protein | 2e-65 | 45 |
| SERP1587 | YP_189152.1 | IS256-like transposase | Not tested | ¥ÕSP¥â | Protein | 2e-65 | 45 |
| IS256 | BAC22941.1 | IS256 transposase | Not tested | etd PI | Protein | 1e-65 | 45 |
