Gene Information

Name : WcaJ (PTH_1100)
Accession : YP_001211650.1
Strain : Pelotomaculum thermopropionicum SI
Genome accession: NC_009454
Putative virulence/resistance : Virulence
Product : sugar transferases
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1129375 - 1130001 bp
Length : 627 bp
Strand : +
Note : involved in lipopolysaccharide synthesis

DNA sequence : 
ATGGCTGTTACGAAGAGAAATCAGGCCATTAAAAGGATTTTCGACCTGGCCTGCACTTTAGTGCTGCTGGTAATCTTAAG
CCCTCTGCTGCTCCTGGTGGCGCTGGCCATTAAGGTAACCTCGCCGGGCGAAGTCATCTTCAAGCAGCAGCGCCTTGGGC
TGAACAGGGAAGTTTTTCTGATGTATAAATTCCGCAGCATGATCCCAAACGCCCAGAATATCGGGCCGGGGATGTTTGTG
GAAAAGGACGACCCGCGCATTACGCCCGTCGGGAAAATCCTCAGAAAGACCGGCATTGACGAACTGGCGCAGCTTTTTAA
CGTGATTCGCGGGGAAATGAGCCTGGTCGGCCCCAGGCCCGCCCCGCTGCACCATTTTGGCAAGTACGACGAGAGGCAGT
TAAAGCGCTTTAACGTCAGGCCCGGCATTACCGGGTGGGCCCAGGTCAACGGCCGGGTGGCCCTGTACTGGCCGGAGCGC
ATCGAACTGGATCTCTGGTATGTTGAAAACTATTCCTTCTGGCTCGACCTGAAAATACTGCTCAAAACGGCCGGCACCGT
CCTCTTCCAGCGCGGCGGAACGGCCAGGGAGGACCGGAAAGAAGTTGACCCCTTTATGAAATTATAA

Protein sequence : 
MAVTKRNQAIKRIFDLACTLVLLVILSPLLLLVALAIKVTSPGEVIFKQQRLGLNREVFLMYKFRSMIPNAQNIGPGMFV
EKDDPRITPVGKILRKTGIDELAQLFNVIRGEMSLVGPRPAPLHHFGKYDERQLKRFNVRPGITGWAQVNGRVALYWPER
IELDLWYVENYSFWLDLKILLKTAGTVLFQRGGTAREDRKEVDPFMKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-23 46
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 8e-23 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WcaJ YP_001211650.1 sugar transferases VFG1309 Protein 6e-24 43
WcaJ YP_001211650.1 sugar transferases VFG1369 Protein 8e-24 43
WcaJ YP_001211650.1 sugar transferases VFG0032 Protein 5e-13 41