Gene Information

Name : PTH_1075 (PTH_1075)
Accession : YP_001211625.1
Strain : Pelotomaculum thermopropionicum SI
Genome accession: NC_009454
Putative virulence/resistance : Virulence
Product : nucleoside-diphosphate sugar epimerases
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 1104559 - 1105980 bp
Length : 1422 bp
Strand : +
Note : -

DNA sequence :
GTGGTGACAGCAAAAGCAAAGCCGGTGTTGATTATTGGAGCCGGAGTGGCCGGCGGAGTTGTGGCGGAGGTTCTGTCTAA
AAACCGGAACAGGGAATTCGAACCGGTTGGTTTTGTGGACGACGATCCAGAAAAACAGCAAAAGATCCTGCACGGCCTGC
CGGTTCTGGGAACCAGGGAGGATATTCCTGCCCTTGTAAGGCGGCTCAATATCGAGGAAATAATTATCGCCATTCCCTCC
GCACGGGGACAGGTTGTCAGCCAGATCGTGGAGATCTGCCAGAGGAGCAGGGCGCGGTTGAAAATCCTGCCGGGATTTTA
CGACCTGATCACCGGAAGGATCAAAATCAGCAAGATCAGGGACGTGGAAATAGACGACCTGCTCGGCCGGGAACCCGTTT
TCCTGAATGTGGAGCAGGTTGCCGGGTACCTGGCCGGGCGGACCGTGTTGATAACAGGCGCCGGCGGTTCCATAGGCTCC
GAGTTGAGCCGCCATCTGGCGCGGTTTTCACTGAAAAAGCTGATCTTGCTGGGGCGTGGAGAAGGCAGCATTTACGAAAT
AGAGTCCGACCTGAGGGATAATTATCCAGGACTGGGAATGGAGGCGGAGATCGGTGATATCAGGGATCGGCCCCGTATGG
ATAAGATATTCGGCAGCCACAAGCCGGACGTGGTGTTTCATGCTGCAGCCCACAAGCACGTTTTTTACATGGAGCGGTGC
CCTGACGAAGCCGTTAAAAACAATATCATCGGGACCAGGAATGTTGCTGAAGCGGCCTTCCGGAACGGCGTCGGCACGTT
TATTTTAATCTCCTCGGATAAGGCGGTAAATCCTGCCAGCATCATGGGTGCCACCAAGCGGGTGGCGGAAATGATTATTC
AAACCATGAACGACAGGGGAGGAACGCGTTTTGCCGCCGTTCGCTTTGGCAACGTCCTGGGCAGCCGGGGCAGCGTGGTT
CCGCTGTTTAAAAGGCAGATTGCGCGAGGGGGGCCCGTAACCATAACCCATCCCGGCATGGTCCGCTACTTCATGACCAC
CGGCGAGGCGGCGCAACTGGTCATCGAGGCCGGAGCTCTGGCCCGGGGCGGGGAAATATTCGTCCTGGACATGGGGCGGC
CGGTGAAGATCATAGATCTGGCCAGAAACCTGATCCGGCTGTCCGGCTACGAGCCCGGAAAAGACATCCGGTTCCGGTTT
ACGGGGATGCGCCCGGGTGAAAAGCTGGTTGAGCAGTTGGTAGGAGATGATGAGGAGGTTGTGCCGACCGGGCACAAACG
CATTTTTGCCATATCCGGCCGCCGCTGGGAGCCTGCAAAGCTCAAGGCCCTTTTAGACGCCTTTGAAAACCCGGGCTTTT
CCTACCAGGAGCGGGAGATAATAGCCCTGCTGCAAACAGTTTTGCCGGACTTTAAAAAATAA

Protein sequence :
MVTAKAKPVLIIGAGVAGGVVAEVLSKNRNREFEPVGFVDDDPEKQQKILHGLPVLGTREDIPALVRRLNIEEIIIAIPS
ARGQVVSQIVEICQRSRARLKILPGFYDLITGRIKISKIRDVEIDDLLGREPVFLNVEQVAGYLAGRTVLITGAGGSIGS
ELSRHLARFSLKKLILLGRGEGSIYEIESDLRDNYPGLGMEAEIGDIRDRPRMDKIFGSHKPDVVFHAAAHKHVFYMERC
PDEAVKNNIIGTRNVAEAAFRNGVGTFILISSDKAVNPASIMGATKRVAEMIIQTMNDRGGTRFAAVRFGNVLGSRGSVV
PLFKRQIARGGPVTITHPGMVRYFMTTGEAAQLVIEAGALARGGEIFVLDMGRPVKIIDLARNLIRLSGYEPGKDIRFRF
TGMRPGEKLVEQLVGDDEEVVPTGHKRIFAISGRRWEPAKLKALLDAFENPGFSYQEREIIALLQTVLPDFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 2e-90 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PTH_1075 YP_001211625.1 nucleoside-diphosphate sugar epimerases VFG0029 Protein 3e-73 41