Gene Information

Name : yfeA (DNO_0644)
Accession : YP_001209553.1
Strain : Dichelobacter nodosus VCS1703A
Genome accession: NC_009446
Putative virulence/resistance : Virulence
Product : periplasmic iron-binding protein YfeA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 688490 - 689392 bp
Length : 903 bp
Strand : -
Note : identified by match to protein family HMM PF01297

DNA sequence : 
ATGAAAAAATCATTTCTTAACTCAATGATGGTACTCATTTTGACGTTTTTTTGCTCGGCAGCGATGGCGCAAAAATTCAC
TGTTGTAAGCACATTCACCGTCATTGCTGATATTGCTCAAAATATTGCTGGTGAACACGCTGATGTTTTTTCTATTACTA
AAGCTGGCGCTGAAATCCACGATTACGAACCTACGCCTCATGATTTGGTTACCGCCCAAAAAGCGCAACTTTTATTACAT
AATGGATTGCAACTAGAACGTTGGTTTGAGCGTTTTCATCAATCATTAAAAAATGTGCCAGCAGTAACAGTCAGTGCGGG
GGTAGTACCCATTCCTATTGAAGGTGATTCTGGCATTCCTAATCCACATGCATGGATGTCGATCGATAATGCTTTGATTT
ATGTTGATAATATCACTCAAGCACTGCAAAAATATGATCCTGAACACGCCAATGATTACGCTGAAAATGCACGGCGTTAC
AAAGAAAAAATTCAAGCGCTTGATACGCATCTTCAGCAAGCTTTTGCCAAAATTCCGGAACAACAACGTTGGTTAGTAAC
CACAGAAGGCGCTTTTTCCTATTTAGCACGCGATTATCACCTTCGTGAAGCCTATGTGTGGCCGGTTAACTCTGAGCAAG
AAGGCACTCCACAACAAATTGCCGATTTAATAGCAACTGTACGAAAACATCAAATTCCTGTCGTATTTAGCGAAAGTACC
CTGTCAGATAAACATGCAAAAGTTGTTGCTAAGGAAACTGGTGCTCAATATGGCGGCGTTTTATACGTTGATTCACTTTC
TACTGCTGATGGCGCGGTACCTACTTATTTAGATTTATTGAAAGTAACTACCGATACAATAATCAGCGGTTTTGAATCTG
CACTCAATAAAAACGCTAAGTAA

Protein sequence : 
MKKSFLNSMMVLILTFFCSAAMAQKFTVVSTFTVIADIAQNIAGEHADVFSITKAGAEIHDYEPTPHDLVTAQKAQLLLH
NGLQLERWFERFHQSLKNVPAVTVSAGVVPIPIEGDSGIPNPHAWMSIDNALIYVDNITQALQKYDPEHANDYAENARRY
KEKIQALDTHLQQAFAKIPEQQRWLVTTEGAFSYLARDYHLREAYVWPVNSEQEGTPQQIADLIATVRKHQIPVVFSEST
LSDKHAKVVAKETGAQYGGVLYVDSLSTADGAVPTYLDLLKVTTDTIISGFESALNKNAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-87 59
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-87 59
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-87 59
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-87 59
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-87 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_001209553.1 periplasmic iron-binding protein YfeA BAC0439 Protein 2e-83 61
yfeA YP_001209553.1 periplasmic iron-binding protein YfeA BAC0349 Protein 6e-88 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_001209553.1 periplasmic iron-binding protein YfeA VFG0525 Protein 5e-88 59