Gene Information

Name : yfeC (DNO_0642)
Accession : YP_001209551.1
Strain : Dichelobacter nodosus VCS1703A
Genome accession: NC_009446
Putative virulence/resistance : Virulence
Product : ABC iron transporter YfeC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 686816 - 687646 bp
Length : 831 bp
Strand : -
Note : identified by match to protein family HMM PF00950

DNA sequence : 
ATGATCAATCTGCTTGAACCATTTCAGTTTTCTTATATGAATACGGCGATGATTGCCGCAACCATTGTGGGCATTTTGTG
TGCGGTTTTATCGGTTTATTTAATTTTAAAAGGCTGGTCATTGATAGGCGATGCTTTGTCGCACGCTGTAGTGCCGGGCG
TCGCCACCGCTTATTGTTTTCAATTACCGTATTTATTAAGTGCGTTGATTGCGGCGGTGTGCGCCGCTTTAACAATGTTG
TTACTTAAAACGCGCAGCCACGTTTATAGCGATGCCATTATCGCTTTTGTTTTATCGCTATTTTTCGCACTTGGTTTATT
GATTATTTCCATTAATCCTACAGCCATTAGTTTAGACGCGATCATTTACGGGCAGATTTTAACGATTTCTTCGGAAGATT
TATGGCAATTATTGTGCATTTCCAGCGTTAGTTTGTGTGTTATTGCTTTGAAATGGCAAGATTTTATGCTGATTTTCTTT
GATGAAACTCAAGCGTTTATTTGTGGTTTAAATTGCCGTTTGCTGCGCTTACTCTTTTTTATATTGCTGACAATATCAGT
TGTTATTTCTCTTCAGGCAGTTGGTGCACTTTTAGTAACCGCGCTGATGATTACGCCGGCAGCAACAGCATATTTGTGTA
GTCGTCGTTTTGGAATTGTATTGATATTTTCAGCGATTATTGGCGGTTTGAGCGGTTTTTTAGGCAGTTATTTAAGTTAC
TTTTTGCACAGCGCCACTGCGCCTTTAATCGTCGTCATTCAAACTCTATTTTTTGTTTTGATTTTTTTATTTACAGCTCA
ACGTGATTTTGTTGTGCGCCGGACGCAATAA

Protein sequence : 
MINLLEPFQFSYMNTAMIAATIVGILCAVLSVYLILKGWSLIGDALSHAVVPGVATAYCFQLPYLLSALIAAVCAALTML
LLKTRSHVYSDAIIAFVLSLFFALGLLIISINPTAISLDAIIYGQILTISSEDLWQLLCISSVSLCVIALKWQDFMLIFF
DETQAFICGLNCRLLRLLFFILLTISVVISLQAVGALLVTALMITPAATAYLCSRRFGIVLIFSAIIGGLSGFLGSYLSY
FLHSATAPLIVVIQTLFFVLIFLFTAQRDFVVRRTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 5e-44 49
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-44 49
sitC NP_461784.1 permease Virulence SPI-1 Protein 6e-44 49
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-44 49
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-44 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_001209551.1 ABC iron transporter YfeC BAC0351 Protein 3e-44 49
yfeC YP_001209551.1 ABC iron transporter YfeC BAC0441 Protein 1e-43 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_001209551.1 ABC iron transporter YfeC VFG0527 Protein 3e-44 49