|
Name : DNO_0536 (DNO_0536) Accession : YP_001209446.1 Strain : Dichelobacter nodosus VCS1703A Genome accession: NC_009446 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 571094 - 572056 bp Length : 963 bp Strand : - Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGACGAGCATTCATTGGATTAATAACGGCGAGAATGTTTTAGCGCTGGAAGCCGCTGCTATTGCCGCACAACGGTTAAC TGATGATTTTGGGCGCGCCTGCGAAACGCTGATGAAAACGCGCGGGCACGTTATCGTGAGTGGCATGGGAAAATCAGGAC ACATCGCGGCAAAATTAGCGGCAACTTTTGCCAGCACGGGCACACCGGCGTTTTTTGTGCACCCGTCAGAAGCGGGTCAT GGTGATTTAGGCATGATTACCGCCGCTGACACGTTGCTGATGTTGTCATTTTCTGGGGAAAGCGGTGAATTGTTGGCGAT GCTGCCAGCGTTAAAAACGTTAGCCGTGCCCGTGATTGCGATGACGGGCAATCCGCAATCGCATCTCGCGCAAAACGCGG ATATTCATATCCCAATTCATATTGAACGCGAAGCCTGTCCATTAAATTTGGCGCCGACGGCAAGCACAACGGCAATGCTC GCCGTTGGCGATGCTTTGGCAATCAGTTTGATGCAGGCACGGGATTTTAATGATGAGGATTTTGCCCGTTCGCACCCGTT TGGACGTTTGGGACGGCGGTTGACGATTAAAGTTGCCGATATCATGCGCCCTTTTGCGCAATTGCCGTTAAATCTGCCCA CGGATAGCGTGCAAACGGCATTATTTCAAATTACCGATAAACGTTTGGGTATGACGTTGATCGCGCAGGAAAAAAAATTG CTCGGTATTTATACCGACGGCGATTTACGCCGCACGCTCGGCGCTTTTAGCAATGCGCTTCATTTGCCGCTGGAGCACGT GATGACGAAAAATCCTAAAACCATCACGGAACATTGTCTTGCCGCAGAAGCATTGCATTTGATGCAGCAACAGCAAATTA CGGTTTTGCCGGTTTTAACGATTGAGCAGCAATTATGCGGCGCCGTGCATATTCATGATTTGATTGCCGCGGGCGTGGCA TGA Protein sequence : MTSIHWINNGENVLALEAAAIAAQRLTDDFGRACETLMKTRGHVIVSGMGKSGHIAAKLAATFASTGTPAFFVHPSEAGH GDLGMITAADTLLMLSFSGESGELLAMLPALKTLAVPVIAMTGNPQSHLAQNADIHIPIHIEREACPLNLAPTASTTAML AVGDALAISLMQARDFNDEDFARSHPFGRLGRRLTIKVADIMRPFAQLPLNLPTDSVQTALFQITDKRLGMTLIAQEKKL LGIYTDGDLRRTLGAFSNALHLPLEHVMTKNPKTITEHCLAAEALHLMQQQQITVLPVLTIEQQLCGAVHIHDLIAAGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 4e-48 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-48 | 44 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-48 | 44 |
