Gene Information

Name : DNO_0456 (DNO_0456)
Accession : YP_001209370.1
Strain : Dichelobacter nodosus VCS1703A
Genome accession: NC_009446
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 496925 - 498514 bp
Length : 1590 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGTCGCTGTTAACGATTGAACAATTAAGCGTTTATTTTCAAAATGATAAAACGCGTCATGGCGCCGTTGAGGCATTATC
TTTGCATCTCGATCGCGGCGAATTTTGCGCATTAGTTGGTGAATCGGGATCGGGAAAATCGGTGACCGCGTTATCGGTTT
TGCGTTTATTGCCGCCGCAAACAACGATTTATGCCCCCGATAGCCGCATTATTTTTGATGGCGTGGATTTATTGACGTGT
TCGGAGCCGGATTTGCGCGCGATTCGCGGACGGCGTATCAGTATGATTTTTCAGGAACCGATGAGTGCGTTAAATCCGTT
TATGAATATTGGCGCACAATTGACGGAAGCTGTGCGCGCGCATCAACCGCGGCTCGCTAAAAAAGTGGCGCGCGAAAAAA
TTATTGCGTTGTTGCAGCGGGTTAAAATCGATGCGCCGGAAATGATGCTGCGGCGTTATCCGCATGAATGTTCGGGCGGT
CAATTGCAACGCATTATGATTGCGATGGTGCTGCTTAATCAGCCTGATATTTTAATCGCCGATGAACCAACCACCGCGTT
AGACGTGACCATTCAAGCGGAAATTCTCTATTTATTACAACAACTTCAACAAGAATTATCGATGGCAGTTTTATTGATTA
CGCATGATTTACATTTGGCGCGGCATTATGCGCAGCGCGTTTACGTCATGCAGGCGGGAAAACTGGTTGAAACGGGTACG
GTAGCGCAAATTTTTACCCAACCGCAGCAGGATTACACGCGCATTTTAATTAAAGCCGTGCCACAAACGGCGCCGGCGCC
GCTTCAAAATGAGCGCACGATTTTAGTGCAAGCGCATCACGTGCGCGTTGATTTTATGCAACGGAAATTTTTGTGTTCAA
AACAGCGTTTTTGTGCGCTGGAAGATGTTTCTTTTACTTTGCCGGCGGGGACAACTTTGGGCGTTGTTGGCGAATCGGGA
TCGGGCAAAACGACTTTGGGAAAAGCGTTGTTGCAAATGGTGCCGTATCGCGGTGATGTTTTCTTTTTAGAAAAAAATAT
CGCGCATTTAACCGCTGATGAACGGCAGCGTTTGAAAGCCGATCGGCAAGTGGTTTTTCAAGATCCGATGCGCTCATTGT
CGCCGCGGTTGACGGTCGGGGAAATTGTCGGTGAGGGTTTACGCGTGCACGCGCCGGAATTATCAGCCAAAGCGCGCCGC
GATCGGGTGGCAGCAGCATTAGCAGAAGTAGGTTTGACGGCGGAGATGATGCAGCGTTATCCGCACGCGTTTTCCGGCGG
ACAAAGACAGCGGATTGCAATCGCGCGCGCGATGATTTTGCAACCCAAATTTATCGTGCTCGATGAACCAACATCGGCTT
TGGATCGCGTGATTCAAATGAAAATATTAGAATTATTGCGCGATTTGCAAAGTAAATATGGATTGAGTTATTTATTTATC
AGCCATGATTTGGCGATGATTCGCGCGTTGAGTCATCAGGTTTTGGTGTTGCAAAGGGGAAAAGTGGTGGAGCGCGGCAC
AACCGAAGCGATTTTTTCGGCGCCGCAAATGCCGTATACCCAGCGATTGTTGGCATCGGCTTTATATTGA

Protein sequence :
MSLLTIEQLSVYFQNDKTRHGAVEALSLHLDRGEFCALVGESGSGKSVTALSVLRLLPPQTTIYAPDSRIIFDGVDLLTC
SEPDLRAIRGRRISMIFQEPMSALNPFMNIGAQLTEAVRAHQPRLAKKVAREKIIALLQRVKIDAPEMMLRRYPHECSGG
QLQRIMIAMVLLNQPDILIADEPTTALDVTIQAEILYLLQQLQQELSMAVLLITHDLHLARHYAQRVYVMQAGKLVETGT
VAQIFTQPQQDYTRILIKAVPQTAPAPLQNERTILVQAHHVRVDFMQRKFLCSKQRFCALEDVSFTLPAGTTLGVVGESG
SGKTTLGKALLQMVPYRGDVFFLEKNIAHLTADERQRLKADRQVVFQDPMRSLSPRLTVGEIVGEGLRVHAPELSAKARR
DRVAAALAEVGLTAEMMQRYPHAFSGGQRQRIAIARAMILQPKFIVLDEPTSALDRVIQMKILELLRDLQSKYGLSYLFI
SHDLAMIRALSHQVLVLQRGKVVERGTTEAIFSAPQMPYTQRLLASALY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 9e-84 42