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Name : pilR (DNO_0435) Accession : YP_001209349.1 Strain : Dichelobacter nodosus VCS1703A Genome accession: NC_009446 Putative virulence/resistance : Virulence Product : two-component response regulator PilR Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 473960 - 475546 bp Length : 1587 bp Strand : + Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954 DNA sequence : ATGAATCACGCGTTAGTTGTTGATGATGAAAAAGATATCTGCGAATTAATTGAAATGGCATTAATGGGACAATATATTGA ATTTAAAAGCGCTTTTAATGTTAAAACGGCGATTAAATTATTAAAAGAAAATCGTTTTGACGTTGTTTTTTGTGATGTGC GTTTGCCTGATGGCGACGGTCTCGATCTGCTCGCCCATATTCAAAAACAATATCCCAATACGCCCGTATGCATGATAACG GCGCACGGCAATATGGATATGGCAATTCGGGCGTTGAAAATCGGCGCTTTTGATTTTATTAATAAACCTTTTGAATTGAA ACAGTTACGCACAATTTGCCGTTCAGCGTTAAGCAGTCAACCTAAAAATAAAAAAGATAACGGGGAACCGCGAAAAACGG CATTAATCGGCGAGGCACCGGTGATGGAAAAAGTGCGGGCATTGATTGCAAAAGTCGCGCGGTCGCAAGCGCCGGTATTT ATTCACGGCGAATCGGGTACGGGAAAAGAAGTTGCCGCGCGGTCAATTCACGAACAAAGTAACCGCGCCGACGGCGCTTT TATTGCCGTTAACTGCGGTGCAATTCCGGAAAATTTAGTGGAAAGTGAATTTTTTGGTTATAAAAAAGGTTCATTTACCG GCGCTAATCAAGATACGGATGGGTTATTTGTTGCTGCAAATGGCGGTACGCTTTTTTTAGATGAAGTTGCAGATTTGCCG TTATCGATGCAAGTAAAATTGTTGCGCGCGATTCAAGAGCGGGCGGTGCGTCCGATTGGCGGCGATAAAGAGGAAAAGGT TGACGTGCGCATTATTTCGGCAACGCACGATAATTTGGCAGAAAAAGTGCAATTGGGCGAATTTCGCGAGGACTTGTATT ACCGTTTAAACGTTGTTGCATTAACGATGCCGCCGCTGCGCGATCGCACGGGCGATGTCAATATATTGACAGATTTTTTG TTAAAAAAATTAGCCGAACAACGCGGTTATCCGTTAGCGAAATTAACCGATGAAGCGCTTAATAAATTAAATTCTTATGC TTTTCCGGGCAATGTGCGCGAATTGGAAAACATTTTGGAGCGCGCGCTGACTTTTATGGACGGAGAACAAATTGAAGCCG AAGATATTCATCTTAATCTTGCATTGCAAGCGGCGATGAAACCGGCGGCAACCAATGAGGAAGAGGATATCTTTTTCGGC ATTGAAACGAAATCTAATAAAGAAACGGAACCCAACGAAAATAACGATGGCGGTTTTCAAAATAATATTGGCTACGTTAG CAATAATCCGCCGCCGCTCAACGCGTTTTCTTTCCAATTTCACGATGAACAAACAAAGCAAACAACGGCGCCTTCATCTC AAACGCCGCCGCCAACGATTCAAAAATCTTCCGAACGCGTACATAAATCAGATGAAAAAGCGCAGGAAATGCCCGACGAT CTCGAAGGGTTTATGCAAGAAATGGAGCGCAAATTGTTGATTAAAGCCTTAAAAGAAAACGGCAACAATAAAACGAAAGC CGCCGAATCTTTGGGCATTAGTTTTCGGGCAATGCGTTATAAATTAAAAAAATTAGGAATTGATTGA Protein sequence : MNHALVVDDEKDICELIEMALMGQYIEFKSAFNVKTAIKLLKENRFDVVFCDVRLPDGDGLDLLAHIQKQYPNTPVCMIT AHGNMDMAIRALKIGAFDFINKPFELKQLRTICRSALSSQPKNKKDNGEPRKTALIGEAPVMEKVRALIAKVARSQAPVF IHGESGTGKEVAARSIHEQSNRADGAFIAVNCGAIPENLVESEFFGYKKGSFTGANQDTDGLFVAANGGTLFLDEVADLP LSMQVKLLRAIQERAVRPIGGDKEEKVDVRIISATHDNLAEKVQLGEFREDLYYRLNVVALTMPPLRDRTGDVNILTDFL LKKLAEQRGYPLAKLTDEALNKLNSYAFPGNVRELENILERALTFMDGEQIEAEDIHLNLALQAAMKPAATNEEEDIFFG IETKSNKETEPNENNDGGFQNNIGYVSNNPPPLNAFSFQFHDEQTKQTTAPSSQTPPPTIQKSSERVHKSDEKAQEMPDD LEGFMQEMERKLLIKALKENGNNKTKAAESLGISFRAMRYKLKKLGID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 3e-84 | 49 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 3e-84 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilR | YP_001209349.1 | two-component response regulator PilR | VFG1214 | Protein | 6e-100 | 57 |
| pilR | YP_001209349.1 | two-component response regulator PilR | VFG1249 | Protein | 6e-66 | 42 |
