Gene Information

Name : dksA (DNO_0353)
Accession : YP_001209272.1
Strain : Dichelobacter nodosus VCS1703A
Genome accession: NC_009446
Putative virulence/resistance : Unknown
Product : RNA polymerase-binding protein DksA
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 387778 - 388209 bp
Length : 432 bp
Strand : -
Note : identified by match to protein family HMM PF01258; match to protein family HMM TIGR02420

DNA sequence :
ATGAAAGAACTTATTAAAATAAAAAATAAATATACTCCCGCCGCCGATGAACCTTATATGAGCGAACAACAGCTCGATTA
TTTTTCGCGCATTTTGCAAGAATGGAAAGCGACAATTTTGGCAGATAGTGAAAAAACCCGTGAATATTTAAAAGACGAAC
GTCCACAAACCGCCGATTTAAACGACCGCGCATCGCAAGAAGAAGAATTTTCATTGGAATTGCGCACCCGCGATCGGGAA
CGAAAATTATTAAGAAAAATCGATAAAGCGTTGGAACGCATTAAACAAGGGCATTTTGGTTATTGCGAACAATGCGATGA
AGAAATCGGTTTTCATCGTTTAGAAGCGCGCCCAACGGCAGAATTGTGCATTGATTGCAAACATCTTGCCGAACGCAAAG
AAAAATCGTTTTATAACGAACGCAACGAATGA

Protein sequence :
MKELIKIKNKYTPAADEPYMSEQQLDYFSRILQEWKATILADSEKTREYLKDERPQTADLNDRASQEEEFSLELRTRDRE
RKLLRKIDKALERIKQGHFGYCEQCDEEIGFHRLEARPTAELCIDCKHLAERKEKSFYNERNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00314 YP_008207779.1 DnaK suppressor protein Not tested AbaR25 Protein 3e-35 60
BJAB0868_00318 YP_008211644.1 DnaK suppressor protein Not tested AbaR26 Protein 3e-35 60