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Name : dnaB (DNO_0324) Accession : YP_001209244.1 Strain : Dichelobacter nodosus VCS1703A Genome accession: NC_009446 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 345802 - 347187 bp Length : 1386 bp Strand : + Note : identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665 DNA sequence : ATGATCGAATACGACAATCAGAATAATCGCGTCAAAGAATCTCCCAAATCGCAAGAAGCTGAACAAGCCGTTATTGGCGC TTTATTGTTGGATAACGACCGTTGGGACGATGTTGCCGATTATCTGATTGCTGATGATTTTTTCTTTCAAAATAATCGCT TAATCTTTCAAGTAATGAGCGAACTTTCTTTGCGCAATGAACCGTTTGACGTTTTAACCATCGGCAATCTTTTGCGAGAA AATGAAGCGTGGGAACAAATGGGCGGCGGCGAATATTTGCGCCAATTAGCCATGGAAACGCCGAGCGCGAGTAACGTCAT CGTTTATGCCAAAATCGTGCGCGAACAAGCCATTAAACGCAAATTAATCGCGGCTGCTGGCGATATTGCCAACAGCGCTT ATTTTCCAGAAGGGCGCGATGCGCGCAGCATTTTAGATAACGCCGAACAAAAAATATTTAACATCGCGGAAATGTATCAA AAAAATACCCGCGACGGATTGCAAAGCATTAAAAAAGCGGCGGCAGAAACGTTGCGCTACATTGAAGAATTAAGCAAATT AGATTCGCCGATTACTGGCATTTCTACGGGATTCGTCGATTTAGATCGCGAAACTGCTGGATTGCAACGCGGCGATTTAA TTATCGTTGGTGGACGACCATCGATGGGAAAAACATCTTTTGCGATGAATATTGCCGAAAGCGTGGCGATTGGCAGCGGG TTGCCGGTGGCGATTTTCTCGCTGGAAATGCCGGCGCGATCATTGGTTATGCGATTAATTGCTTCTTTAGCGCGCGTGGA TAACAGTCGCCTGCGGTTGGGAAAAATTAAGACTAATGAAGAAATGAGTAAATTTACATACGCATTGCATCAACTCAATC AAGCGCCGATTTTTATTGATGATGGCGGTAATATTTCTGTGCACGAATTGCGCGCGCGCGTGCGGCGTTTAAAACGCGAA CAGGGCGAATTGGGGTTAGTGTTAATTGATTATTTGCAACTTATGCAAATGCCAGATAATAGCGAAAACCGCGCCACGCA AATGGGCGATATTTCGCGGGCGCTGAAATTATTAGCTAAAGAAATGGACGTGCCCGTCATTGCTTTATCGCAACTCAATC GTGCTTCGGAAAAACGCATGGATCAACGCCCCGTGATGTCGGATATTCGTGAATCGGGCGCAATTGAACAAGATGCTGAT GTGATTATGTTCGTTTACCGCGATGAGGTTTATCATAAAAACCGCGATGATAATAAAGGACTGGCAGAAATTATCATCGG TAAACAAAGAAACGGTCCCATCGGAACGGTGAAACTCGCTTTTCGCGGCGAATTTACCCGTTTTGATGATTATTCGGACA GAGAAATGCCAGACTGGGAAAATTAA Protein sequence : MIEYDNQNNRVKESPKSQEAEQAVIGALLLDNDRWDDVADYLIADDFFFQNNRLIFQVMSELSLRNEPFDVLTIGNLLRE NEAWEQMGGGEYLRQLAMETPSASNVIVYAKIVREQAIKRKLIAAAGDIANSAYFPEGRDARSILDNAEQKIFNIAEMYQ KNTRDGLQSIKKAAAETLRYIEELSKLDSPITGISTGFVDLDRETAGLQRGDLIIVGGRPSMGKTSFAMNIAESVAIGSG LPVAIFSLEMPARSLVMRLIASLARVDNSRLRLGKIKTNEEMSKFTYALHQLNQAPIFIDDGGNISVHELRARVRRLKRE QGELGLVLIDYLQLMQMPDNSENRATQMGDISRALKLLAKEMDVPVIALSQLNRASEKRMDQRPVMSDIRESGAIEQDAD VIMFVYRDEVYHKNRDDNKGLAEIIIGKQRNGPIGTVKLAFRGEFTRFDDYSDREMPDWEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-82 | 47 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 8e-80 | 44 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-80 | 44 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 8e-75 | 44 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-77 | 43 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-77 | 43 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 8e-74 | 42 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 2e-60 | 41 |
