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Name : kdsB (DNO_0304) Accession : YP_001209224.1 Strain : Dichelobacter nodosus VCS1703A Genome accession: NC_009446 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 323337 - 324071 bp Length : 735 bp Strand : + Note : identified by match to protein family HMM PF02348; match to protein family HMM TIGR00466 DNA sequence : ATGACGCCTGATATTCGTGTGGTGATTCCAGCGCGTTATGCTTCAACGCGTTTGCCGGCAAAACCGCTGGCTTTAATTGG CGGCGTGCCGATGATTGTGCGCACCGCGCAGCAAGTGGCTCAAGCAGGTTTCCCTTATTGTGTGGCGTACGATGATGAAC GTATTGGCGACGTTTTAGCCGCGCATCATATTCCTGCAATAAAAACGCGTTTTACACATGAAAATGGTACGCAGCGTTTG AGTGAAGTCGTCATTGCGCGCGCGTGGACAGATGAAACGATTGTGGTTAACGTGCAAGGCGATGAGCCGTTATTACCGCC CGATTTGATTACCACCGTTGCCCGTACGCTTATCGAGCATACTCAAGCCAGTGTGGCGACGCTGGCAACGGTTTGTGATG CGCCTGAATCGCCCAATACCGTTAAAGTGGTGTGCGATTGTGCGGGTTATGCTTTATATTTTTCGCGCAGCGTGATGCCT TACGTGCGCGATGCCGCGGCGCCGCCGGTTTCTTATTTGCGCCACATCGGCATTTATGCTTACCGCGTGCAATTATTGAA ACGTTATCCGCAACTGGCGCCAACGCCTTTAGAACAAGCCGAAAAACTCGAGCAACTGCGTTTTTTGGAACACGGTTTTA AAATTGCGGTTGCGCAAATTGATGAAGCGCCGCCTGCTGGTGTGGACAGTCCCGAAGATTTAGCGCGCGTGCAGGCATTA TTCGTTCATGAATAA Protein sequence : MTPDIRVVIPARYASTRLPAKPLALIGGVPMIVRTAQQVAQAGFPYCVAYDDERIGDVLAAHHIPAIKTRFTHENGTQRL SEVVIARAWTDETIVVNVQGDEPLLPPDLITTVARTLIEHTQASVATLATVCDAPESPNTVKVVCDCAGYALYFSRSVMP YVRDAAAPPVSYLRHIGIYAYRVQLLKRYPQLAPTPLEQAEKLEQLRFLEHGFKIAVAQIDEAPPAGVDSPEDLARVQAL FVHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-34 | 43 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 3e-34 | 43 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-34 | 43 |
