Gene Information

Name : hemC (DNO_0299)
Accession : YP_001209219.1
Strain : Dichelobacter nodosus VCS1703A
Genome accession: NC_009446
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 316818 - 317735 bp
Length : 918 bp
Strand : -
Note : identified by match to protein family HMM PF01379; match to protein family HMM PF03900; match to protein family HMM TIGR00212

DNA sequence :
ATGTCTACTTTACGCATCGCAACCCGAAAAAGTCCCCTCGCTTTATGGCAAGCCGAACACGTCGCCCAACAATTAAAGCA
ACATTATCCCGAATTAACCGTGGAGCTCGTTCCCATCGTCACGCAGGGCGATATTTTAGCGCATACGCCGTTATCAAAAA
TTGGCGGTAAAAACTTATTCATCAAAGAATTAGAAATCGCGATGCAACAAAACGCTGCCGATATTGCCGTGCATTCCATG
AAAGATGTTGGCGTGACTTTGCCGGAAGGTTTTGTGCTCGCTGCGATTTTGCCGCGGGAAAATCCTTTTGATGCGCTGGT
GAGCAATCATTATGCCCATTTAAACGAACTCCCTAACGGCGCCCGCGTGGGTACGTGTAGTTTACGGCGCAAAATGCAAC
TCGCGCACTATCGTCCCGATTTAAAACTCATCGATATTCGCGGTAACGTTCACACGCGGCTACAAAAACTGGATTCCGGC
GCGTTTGATGCGCTGATTTTAGCCTGCGCGGGGCTGATTCGTTTACAACAAAACGCGCGCATTCGGCAAATTTTGCCGGC
GGAAATTTCGTTGCCGGCAATTGGACAAGGCGCAATTGGCGTTGAATGTCGGGCGGATAGCCCATTTTTAGCGCATATTC
AAACTTTAAATCATTTTGAAACTGCCGTTTGCGTTCAAACCGAGCGCGTCGTTAATCAACGTTTGCAAGGTGATTGCCAA
GTGCCGATCGCGGTTTTTGCCACACTTTCCGGCAAAACGATGACCTTACAAAGTCGTATCGGCACAATTGACGGACAGCG
TATGCTGGCACATCAAGAAATTTGTGCGTTGGAAGATGCGGAAAAAGCCGGCGCACGTTGTGCAGAAGCATTGATCCAAC
AAGGCGCGCAGGATATTTTGCATGAATACAGAAAATAA

Protein sequence :
MSTLRIATRKSPLALWQAEHVAQQLKQHYPELTVELVPIVTQGDILAHTPLSKIGGKNLFIKELEIAMQQNAADIAVHSM
KDVGVTLPEGFVLAAILPRENPFDALVSNHYAHLNELPNGARVGTCSLRRKMQLAHYRPDLKLIDIRGNVHTRLQKLDSG
AFDALILACAGLIRLQQNARIRQILPAEISLPAIGQGAIGVECRADSPFLAHIQTLNHFETAVCVQTERVVNQRLQGDCQ
VPIAVFATLSGKTMTLQSRIGTIDGQRMLAHQEICALEDAEKAGARCAEALIQQGAQDILHEYRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-73 55
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-73 55