Gene Information

Name : intA1 (DNO_0282)
Accession : YP_001209203.1
Strain : Dichelobacter nodosus VCS1703A
Genome accession: NC_009446
Putative virulence/resistance : Unknown
Product : integrase A1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 299986 - 301191 bp
Length : 1206 bp
Strand : -
Note : identified by match to protein family HMM PF00589

DNA sequence :
ATGTTAGGCAATCATTTTTCTAACATCATGCGACTCACTGACAAAATCATTCAAACAGCAAAAAAGCCCAGCAGAGGCTA
TCTTCGCCTAACTGATGGCGATGGTTTAACACTCAAAATTACCGATAGAGGCTCATATTTTTGGAATTTCCGCTATTACA
TTAACGGGCGTGAACGCAATATGTCATTGGGGCGCTATCCTGCAATGAGTATTGAAGCTGCACGCGGTGAAGCCTTAGAA
CTGCGCTATCACTTACGCCAAGGCTTAGACCCTTTAGCAGAACGCAAGAAAAAGCAAGCAGCTTATTTAGCCGAAGAAAA
AACTCAAAAAGAAACTTTTGAGTTTGTTGCGCGCGAATGGTACCAACTCAAGCGCCCTGAATGGAAAAATGAAAAGCACG
CACAACAAGTGATTACTACTTTGGAACAGTTTGTTTTCCCTTTCATTGGCAAAAAACCGATTAGCAGAATTTCACCGCCT
GAATTGCTTAAAGTCATGGAAAAATTGTACGACCGACCAGAGACCGCAAGCCGAGTGAAGCAGCGTATACGTGCCGTTTT
TGATTATGCCATTCAAACAGACCGCCTCAGTAGGAATCCTGCCATTGCCTTACCGAAAATCTTTCGCAGCACCATTGCAA
AACAACCTTCTTTGCCTGCTAGAGAATTGGGCATTTTTTTCAAACAGCTTGACACTTACGGCAACCCAAAAACTGCCTTA
GCTTTACGCCTACTTATCCTTACCATGACAAGAAGCGGAGAATTGCGCTTTGGACAATGGCAAGAGTTGCAAGGCAATGA
ATGGCATATTCCAGCCGAACGCATGAAGATGAACCGTCCGCACATTGTGCCGCTATCCGATTGGGCATTAGAAATCTTGG
ACGAATTAAGAAGTTTACGCAGAAATAACAGCCCTTATTTTGTAACAGGCAACCGTAACACACCGCTAAGCGACACGACG
CTATCACTTGCTATGAAGCGTTTAGGGTATGCAGGGCGAGCTGTACCGCATGGCTTTAGAGCCACCGCATCAACGGCAAT
GAACGAATCGGGGTTATGGAATCCCGATGCCATTGAAAGACAATTGGCGCATACAGACGAAAACGCGGTTAGAGCTGCCT
ATAACCGCGCGGAGTATTTGGAAGAGCGCCACCGTATGATGCAGTGGTGGGCGGATTATATCCGTAAAAAAATCAGGGTG
AGCTAA

Protein sequence :
MLGNHFSNIMRLTDKIIQTAKKPSRGYLRLTDGDGLTLKITDRGSYFWNFRYYINGRERNMSLGRYPAMSIEAARGEALE
LRYHLRQGLDPLAERKKKQAAYLAEEKTQKETFEFVAREWYQLKRPEWKNEKHAQQVITTLEQFVFPFIGKKPISRISPP
ELLKVMEKLYDRPETASRVKQRIRAVFDYAIQTDRLSRNPAIALPKIFRSTIAKQPSLPARELGIFFKQLDTYGNPKTAL
ALRLLILTMTRSGELRFGQWQELQGNEWHIPAERMKMNRPHIVPLSDWALEILDELRSLRRNNSPYFVTGNRNTPLSDTT
LSLAMKRLGYAGRAVPHGFRATASTAMNESGLWNPDAIERQLAHTDENAVRAAYNRAEYLEERHRMMQWWADYIRKKIRV
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intA AAB00935.1 integrase A Not tested vap locus Protein 0.0 100
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 8e-58 41