Gene Information

Name : DNO_1342 (DNO_1342)
Accession : YP_001210208.1
Strain : Dichelobacter nodosus VCS1703A
Genome accession: NC_009446
Putative virulence/resistance : Unknown
Product : IS200 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 1372591 - 1373007 bp
Length : 417 bp
Strand : +
Note : identified by match to protein family HMM PF01797

DNA sequence :
ATGGAAAAAGAAACTGATTTAAGACGCGGCAGACACGTTGTTTTTAACTTACATGTTCATTTAGTCTTTATCACAAAATA
CCGCCGAAATGTATTCACAAAAGAAATTTTGGACGATATGCAACAGATTTTTGAAAGCGTTTGCACCGATTTTGAAGCGC
AGTTAGTGGATTTTGACGGCGAACACGACCACGTTTATTTGCTTGTGAATTATCCGCCCAAAGTGTCCATTTCCAAACTC
GTGAATAGTTTGAAAGGCGTTTCTAGTCGTATGATTAGGAAAAAAAATTACCCCAGTATTCGTGAGAAACTTTGGGGCGG
CGCGTTGTGGTCGCCGTCTTATTTTGCTGGAAGTTGTGGCGGTGCGCCTGTTACGATTATTCGGCAGTATATTGAGCAGC
AAAATACGCCTGACTGA

Protein sequence :
MEKETDLRRGRHVVFNLHVHLVFITKYRRNVFTKEILDDMQQIFESVCTDFEAQLVDFDGEHDHVYLLVNYPPKVSISKL
VNSLKGVSSRMIRKKNYPSIREKLWGGALWSPSYFAGSCGGAPVTIIRQYIEQQNTPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAR03856.1 transposase A-like protien Not tested cag PAI Protein 4e-38 64
tnpB CAJ31328.1 insertion sequence IS606 transposase homolog B Not tested cag PAI Protein 3e-37 62