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Name : xerD (DNO_1131) Accession : YP_001210015.1 Strain : Dichelobacter nodosus VCS1703A Genome accession: NC_009446 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1176567 - 1177460 bp Length : 894 bp Strand : - Note : identified by match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225 DNA sequence : ATGGATACGAAATTAACACAAGATATTGAATTGTTTATTGATTATTTATGGACGCAAGTTGGTTTGTCTGATGCGACTTT ATCGGCTTACCGCGGCGATTTGCAACAAGTGCAAAAAATATTGGCAGATGTGCCGTTAAAATCGGCAACGATTGAGCAAA TGATGCAGGTGTTGGCGCAGTTTCATGATCGCGGATACAGTCATACCAGCATGGCGCGAATGCGCAGTTCGTTAAACCGT TTTTTTTCTTATCAAATCGAGCAAAAAGAGCGGACAGAAAATCCAATGCATTTTTTAGGACGCACAAAAATTCGGCGGCA TTTACCGCAAACGATGAGTGAAAGCGATGTTGAAGCATTGCTTTCCGCGCCAGATGTGCAAACCATTTTAGGATTGCGCG ATCGGGCGATGTTGGAATTGTTATATGCTTGCGGTTTGCGGGTGAGCGAATTGGTGGGATTGACGCTGCATCAAATTGCT TTAGATGTAGGGTATGTGCAGATTTTAGGAAAAGGCGATAAAGAGCGTTTAGTGCCGTTTGGCGAAATTGCACACGAATG GTTGCAACGCTATATTCAAGAAGCGCGACCGCAATTGTTGGGGCAAAAAATGAGCGATTATGTTTTTGTTTCGCAGCGCG GCGCGGCTTTGAGTCGGCAAGCTTTTTGGTATCGTTTAAAAGTTTATGTGTGCGCGGTTGGGCTCGATAGTAATAAAATT TCACCGCACACGTTGCGTCATGCTTTTGCGAGCCATTTACTCGCGCACGGCGCCGATTTGCGCAGTATTCAAATGTTACT GGGACACAGCGATCTTTCTACCACTCAAATTTATACGCATATTGCCGATCAGCGGTTGAAAAGCTTATTTATGAAACATC ACCCAAGAGCTTGA Protein sequence : MDTKLTQDIELFIDYLWTQVGLSDATLSAYRGDLQQVQKILADVPLKSATIEQMMQVLAQFHDRGYSHTSMARMRSSLNR FFSYQIEQKERTENPMHFLGRTKIRRHLPQTMSESDVEALLSAPDVQTILGLRDRAMLELLYACGLRVSELVGLTLHQIA LDVGYVQILGKGDKERLVPFGEIAHEWLQRYIQEARPQLLGQKMSDYVFVSQRGAALSRQAFWYRLKVYVCAVGLDSNKI SPHTLRHAFASHLLAHGADLRSIQMLLGHSDLSTTQIYTHIADQRLKSLFMKHHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 3e-63 | 52 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 3e-63 | 52 |
