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Name : lpdA (DNO_1100) Accession : YP_001209984.1 Strain : Dichelobacter nodosus VCS1703A Genome accession: NC_009446 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 1142610 - 1144358 bp Length : 1749 bp Strand : + Note : identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350 DNA sequence : ATGGCAAATAAACAAGCCCTTACCATTCCCGATATTGGCGATTTTGCTGATGTTGATGTTATTGAAGTTCTCGTCAAAGT TGGCGACAAAATCGCCGTTGACCAATCTTTGGTGGTTTTAGAATCAGATAAAGCATCAATGGAAGTTCCCGCTAGCATTG CTGGAACCATCACTTCTTTAACAGTAAAAGTCGGCGATAAAGTCTCTGAAGGCAGTGTTATCGGCGAAATTGAAGTGGCA AACGGCGCAAGTGCTGCAAAAACTGAAGAAAAACCTGCAGAAAAAACCGCGGAAAAACCAGCAGCGGCGGCAACACCCGC AGAAAAAACCGCGGTACCCGATGATGCCGTTGATTTAGTTGTAATCGGCGCTGGTCCTGGCGGTTATTCGGCGGCGTTCC GTGCGGCGGATTTGGGATTAAAAGTAACTTTGATCGAACGTTACGCTACTTTAGGCGGCGTTTGCTTAAACGTTGGCTGT ATTCCTTCCAAAGCGTTGTTACACGTTGCAGAAATTATGGAAGAAGCCGAATGGGCAAAAAAAGCCGGCGTCACATTTGC CAAACCCAGCGTAGATTTAGACGCTTTGCGCACACATAAAGAAGGTGTGATTAAAAAATTAACCACCGGTCTTGCTGGCA TGGCAAAAGCAAGAAAAGTAACCGTTATTCAAGGTGTTGCGCAATTTACCGGCAGCCACAGTATTCATATTAAAACCGTT GACGGCGAACAAAATCTCAATTTCAAAAACTGCATCATCGCCGCCGGTTCTGAAAGCGTGAAATTACCTTTCATGCCAAC CGATCCGCGCGTTATCGATTCCACCGGCGCTTTGCAATTGCAAGATATTCCAGAACGATTACTCGTTATCGGCGGCGGCA TCATCGGCTTGGAAATGGCAACCGTTTATCACGCATTAGGCAGCAAAATTGACATCGTCGAAATGATGGACGGTTTAATG GCAGGCGCGGATAAAGATTTAGTAAAAGTATGGCAAAGACGCAATCCCGATCTTTTTGAACACATTTATTTAAATACCAA AACCGTTGCCGCCGAAGCCAAAGATGATGGTATTCACGTTACTTTCGCCGGCGACAAAGCGCCAAAAGAAGCGCAACGTT ACGACCGTGTTTTAATGGCAGTAGGACGCCGTCCAAACGGCAAAACTTTAAATGTGGAAGCTTGCGGCGTCACTGTTGAC GAACGCGGATTTATCCCTGTTGATAAACAAATGCGCACCAATCAAGCCCATATTTTTGCCATCGGCGATATTGTGGGACA ACCCATGTTAGCGCATAAAGCCGTACACGAAGCGCACGTTGCCGCCGAAAATGCCGCAGGACATCAAGCCTTTTTCGATG CGCGCGTAATTCCAGGCGTTGCTTATACTTCTCCTGAAGTTGCTTGGGTGGGCGTTACAGAATCACAAGCCGCTAAAGAA AATATTGCCGTTGAAAAAGCCGTTTTCCCGTGGGCTGCTTCTGGTCGCGCTATTGCAAACGGTTGCGATGAAGGTTTTGT GAAACTGATTGTTGATAAAGCGTCTCAACGCGTCATCGGCGGCGCCATTGTTGGTCCTAATGCCGGCGATATGATCGGCG AAATCGCTTTAGCAATTGAAATGAATGCGGTGCCGGCTGATATCGCTTTAACCATTCACCCGCACCCAACATTAGGCGAA ACCATTGGTTTAGCTGCTGAAGTATTTGAAGGTTCTTGCACGGATTTACCACCGCAAAAGAAACGTTAA Protein sequence : MANKQALTIPDIGDFADVDVIEVLVKVGDKIAVDQSLVVLESDKASMEVPASIAGTITSLTVKVGDKVSEGSVIGEIEVA NGASAAKTEEKPAEKTAEKPAAAATPAEKTAVPDDAVDLVVIGAGPGGYSAAFRAADLGLKVTLIERYATLGGVCLNVGC IPSKALLHVAEIMEEAEWAKKAGVTFAKPSVDLDALRTHKEGVIKKLTTGLAGMAKARKVTVIQGVAQFTGSHSIHIKTV DGEQNLNFKNCIIAAGSESVKLPFMPTDPRVIDSTGALQLQDIPERLLVIGGGIIGLEMATVYHALGSKIDIVEMMDGLM AGADKDLVKVWQRRNPDLFEHIYLNTKTVAAEAKDDGIHVTFAGDKAPKEAQRYDRVLMAVGRRPNGKTLNVEACGVTVD ERGFIPVDKQMRTNQAHIFAIGDIVGQPMLAHKAVHEAHVAAENAAGHQAFFDARVIPGVAYTSPEVAWVGVTESQAAKE NIAVEKAVFPWAASGRAIANGCDEGFVKLIVDKASQRVIGGAIVGPNAGDMIGEIALAIEMNAVPADIALTIHPHPTLGE TIGLAAEVFEGSCTDLPPQKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 5e-63 | 41 |
