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Name : serS (DNO_1065) Accession : YP_001209952.1 Strain : Dichelobacter nodosus VCS1703A Genome accession: NC_009446 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1103529 - 1104809 bp Length : 1281 bp Strand : + Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGATTGATCCCAAATTATTACGTAATGATTTACCCATGGTGGTTGCCGCTTTAGCGCGGCGTGGTTTTGATTTTCCAGA AGCTGAATATCAAAAGTTAGAAGATTTGCGCAAAGCCAGCCAAGTAAAAAGCGAAACGCTGCAAGCCGAACGCAATAAAC TTTCTCAACAAATCGGAAAAGCAAAAAGCAAAGGGGAAGACTGCGCCGATTTGATGGCGCAAGCCGCGCAATTAGAAAGC GAACAAGCCGCCGTTGAAGCATCATTTAACGAAACGCAAAAGCAATTAGATACGCTTTTATCATCTGTGCCCAATCTTCC TGATGACAGCGTTCCTACTGGAAAAGATGAAAACGATAATCCGGAAATTCGCCGCTGGGGCACGCCGCGAACATTTGATT TTACGCCTAAAGAACACGCGGATTTAATGCAAATCGGTTTGGATTTTACCAACGGCGTTAAATTAGCCGGCGCACGGTTT ACCGTATTACGCGGCGCGTTATCACGCCTGCATCGCGCGATTGCGCAATTTATGCTCGATACGCATACCGAAGAACACGG TTATCAAGAAATGTCAGTGCCTTATTTAGTCAATCCGCAAACGATTTACGGCACCGGACAATTACCAAAATTTGAACAAG ATTTATTTAAAACGCGTTTGAGTGACCGCGATTTTTATTTAATTCCCACGGCAGAAGTATCGCTGACAAATTTGGTGGCG CAAGAAATTTTAGAAGAAAGTGTTTTACCGCTGCAATTTGTGGCGCATACGCCTTGCTTTCGTTCTGAAGCGGGTTCTGC AGGACGCGATGTGCGCGGTATGATTCGTCAACATCAATTCGATAAAGTTGAATTAGTTCATATCACTACGCCCGAAGATT CTCACGCGGCATTAGAACGTTTAACCGCGCATGCCGAACGCATTTTGCAAAAATTAGAATTACCGTATCGCGTGATTTTA TTGTGCACTGGCGATATGGGTTTTGCCGCACGAAAAACCTACGACCTTGAAGTATGGTTGCCCGGTCAAGGAAAATACCG CGAAATTTCATCATGCAGCAATTGCTGGGATTTCCAAGCGCGCCGCATGCAAGCACGTTTCCGTGCCGAAGGAGAAAAAA GACCGCAATTGGTGCATACCTTAAACGGTTCTGGACTTGCCGTGGGACGGACGCTGGTTGCCATATTAGAAAATTATCAA CAAGCCGATGGCAACATTTTAATCCCCAAAGCATTACAACCTTATATGAATGGTCTTGATCGCATTACGCCGAGCGCGTA G Protein sequence : MIDPKLLRNDLPMVVAALARRGFDFPEAEYQKLEDLRKASQVKSETLQAERNKLSQQIGKAKSKGEDCADLMAQAAQLES EQAAVEASFNETQKQLDTLLSSVPNLPDDSVPTGKDENDNPEIRRWGTPRTFDFTPKEHADLMQIGLDFTNGVKLAGARF TVLRGALSRLHRAIAQFMLDTHTEEHGYQEMSVPYLVNPQTIYGTGQLPKFEQDLFKTRLSDRDFYLIPTAEVSLTNLVA QEILEESVLPLQFVAHTPCFRSEAGSAGRDVRGMIRQHQFDKVELVHITTPEDSHAALERLTAHAERILQKLELPYRVIL LCTGDMGFAARKTYDLEVWLPGQGKYREISSCSNCWDFQARRMQARFRAEGEKRPQLVHTLNGSGLAVGRTLVAILENYQ QADGNILIPKALQPYMNGLDRITPSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-94 | 55 |
