Gene Information

Name : BRADO0992 (BRADO0992)
Accession : YP_001203144.1
Strain : Bradyrhizobium sp. ORS278
Genome accession: NC_009445
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1054224 - 1054931 bp
Length : 708 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter

DNA sequence :
GTGCTCGCGGCCACCGATCTCGTCCACCACCTCGGCCAGGGCGCCGGCCGGGTGCAGGCGCTGAAGGGCGTAAGCCTGGC
GTTGAAAGGCGGCGAGCTGGTGCTGCTGATGGGCCCGTCGGGTAGCGGTAAGACCACGCTGCTGTCGATCCTCGGCTGCC
TGATGACGCCGGACGCCGGGACGGTGCATGTCGGCGGCCAGGCGGTCGCCGGGCTCGATGCGGAGGCGCTGGCCAAGCTC
CGGCGCGAGCGCATCGGCTTCATCTTCCAGTCCTATCATCTGTTTCCTACGTTGAATGCCGAGGACAATGTCCGCCTCGC
GCTCGATGTGCGCGGCGAGCGGGCGCGGACAGCAAAGGCCGCAGCGCGCGAGGTGCTGGCCACCGTCGGTCTCGGCCAGA
AGCGCAGATCGCTGCCGCGCGAGCTGTCCGGCGGCGAGCAGCAGCGCGTCGCGATCGCGCGTGCCATCGTCGGCAAGACC
CAGGTCATTCTCGCCGACGAGCCGACCGGCGCGCTCGACACTTCCAATGGCCAGGCGATCATGACCTTGCTGGCCGACAT
CGCCAAAGACCCGTCGCGCGCTGTTCTTGTCGTGACACACGATCCGCGCATCCTGCCGTTCGCCAGCCGCGTCGTTCATA
TCGAGGACGGCCGGATCGTCCGCGAGGAGGCAGTGACAGACTCGATGAAGAAGGTCTCGAACGCATGA

Protein sequence :
MLAATDLVHHLGQGAGRVQALKGVSLALKGGELVLLMGPSGSGKTTLLSILGCLMTPDAGTVHVGGQAVAGLDAEALAKL
RRERIGFIFQSYHLFPTLNAEDNVRLALDVRGERARTAKAAAREVLATVGLGQKRRSLPRELSGGEQQRVAIARAIVGKT
QVILADEPTGALDTSNGQAIMTLLADIAKDPSRAVLVVTHDPRILPFASRVVHIEDGRIVREEAVTDSMKKVSNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BRADO0992 YP_001203144.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-39 45
BRADO0992 YP_001203144.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-29 45