Gene Information

Name : BRADO6932 (BRADO6932)
Accession : YP_001208737.1
Strain : Bradyrhizobium sp. ORS278
Genome accession: NC_009445
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 7221753 - 7223378 bp
Length : 1626 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : factor

DNA sequence :
GTGATTCCATCTCCCGCGATGATCACAGCCGATTCGCTCCCCGATGATGTCGCGACGCTGAAGGCGCTGGTGCTCGCCGG
TCAGGCGGCGCAGCTCGCGGCGGAAGCCAAGGCACGCAATCTTGAAGCCGAGGTCCGCGCCCGCACGCTCCTGATCGAGC
AGATGAAGTTCACGATCGCCAAGCTCAAGCACGAGCAGTATGGGCCGTCGTCGGAGCGGGCGTCGGTGCTGGAGCAACTC
GAGCTCGAACTCGCCGATCTCGAAGAGGATGCGGCCGAGGCTGAAGCTGCGGCGCAGATGGCCGCCGAGCGGGCCAAGGC
CGAGACGATCAATGTCCATCCGTTCGAACGCAGGCGCCCAGCACGGCGGCCGCTGCCCGAGCACTTGCCGCGCGAGCGCG
TCGTACATCCCGCACCGGCCAATTGTCCGTGCTGCGGCGGTGACAGGTTGCGCAAGATCGGCGAGGACGTCACCGAGACG
CTGGAGCTCGTGCCACGGCAGTGGAAGGTGATCCAGCATGTGCGCGAGAAGTTCTCCTGTCGCGGCTGCGAGGCGATCAG
CCAGCCGCCGGCGCCGTTCCATCCGATCTCGCGCGGACGTGCGGGGCCGCGCCTGCTCGCACACATCCTGTTCGCCAAAT
ACGGGCTGCATCTGCCGCTCAACCGGCAGAGCACGACCTACGCGCATGAGGGCGTGGCGCTGGACGTCTCGACGCTGGCC
GACTGGGTCGGCGCGGCGGCTGCGACGTTGATGCCGCTGGTCGAGGCGATCAAGGCGCACGTGCTTGCCGGCGAGCGCAT
CCACGCCGACGACACCACGGTGCCGGTTTTGGCCAAGGGCAAGACGCGCACGGGGCGCGTCTGGACCTATGTGCGCGACG
ACCGTCCCTTTGCCGGGCACGCGCCGCCGGCTGCCATGTTCTACTACTCGCCCGACCGCGCCGGCGTGCATCCCGAGACG
CATCTTGCCGGCTACGCCGGGCCGATGCAGGCGGACGCCTATGCTGGCTTCAACCGCCTCTACGAGGCCGCGCGCAAGCC
GGGCCCGGTCATCGAGGTCGGCTGCTGGGCGCATGCGCGGCGCAAGTTCTTCGAAATCGCGCGGCTGAAGAAGGCACCGA
TCGCGATCGAAACGATCGCGAAGATCGACGCGCTGTTTGCGATCGAACGCGAGATCAACGGTCTACCAGCCCACGAACGC
AAAGCCGTGCGCAACGAGCGCAGCCGTCCTCTGGTCGACGAACTCCATGACTTCCTGCGCGAGCGCCGTATCAAGCTGTC
CGGCAAGAGCGAGACCGCCAAGGCAATCGACTACAGCCTCAAGCGCTGGCAGGTGTTCACCCGCTTCATCGACGACGGTC
GTCTGTGCATGACCAACAATGCGGCCGAGCGCGAGCTGCGCGCCGTGGCCCTCGGCCGAAAGAACTGGACCTTCGCCGGC
TCCGACGAAGGCGGTCGCCGCGCTGCCGCCATCTACACGCTGATCCAGACCGCCAAGCTCAATGACGTCGATCCGCAGGC
CTGGCTCGCTGACGTCCTCGCCCGGCTGCCCGATCATCCGGCCAGCAAGGTCGCCGATCTGCTGCCCTGGAGTTGGCTGG
CCGCCCAGGCATCGGCCGCCGCCTGA

Protein sequence :
MIPSPAMITADSLPDDVATLKALVLAGQAAQLAAEAKARNLEAEVRARTLLIEQMKFTIAKLKHEQYGPSSERASVLEQL
ELELADLEEDAAEAEAAAQMAAERAKAETINVHPFERRRPARRPLPEHLPRERVVHPAPANCPCCGGDRLRKIGEDVTET
LELVPRQWKVIQHVREKFSCRGCEAISQPPAPFHPISRGRAGPRLLAHILFAKYGLHLPLNRQSTTYAHEGVALDVSTLA
DWVGAAAATLMPLVEAIKAHVLAGERIHADDTTVPVLAKGKTRTGRVWTYVRDDRPFAGHAPPAAMFYYSPDRAGVHPET
HLAGYAGPMQADAYAGFNRLYEAARKPGPVIEVGCWAHARRKFFEIARLKKAPIAIETIAKIDALFAIEREINGLPAHER
KAVRNERSRPLVDELHDFLRERRIKLSGKSETAKAIDYSLKRWQVFTRFIDDGRLCMTNNAAERELRAVALGRKNWTFAG
SDEGGRRAAAIYTLIQTAKLNDVDPQAWLADVLARLPDHPASKVADLLPWSWLAAQASAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 9e-87 50
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 3e-87 50
unnamed AAC31494.1 L0015 Not tested LEE Protein 2e-87 50
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 3e-87 50
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 2e-87 50
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-87 50
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 9e-88 50
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 4e-87 50
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-87 50
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-86 49
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-86 49
tnp AEA34686.1 transposase Not tested Not named Protein 3e-87 49
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 7e-91 49
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 6e-85 47
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-84 47
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 3e-84 47
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 3e-84 47
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 3e-73 43
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 7e-75 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BRADO6932 YP_001208737.1 transposase VFG0793 Protein 1e-87 50