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Name : clpB (BRADO6450) Accession : YP_001208279.1 Strain : Bradyrhizobium sp. ORS278 Genome accession: NC_009445 Putative virulence/resistance : Virulence Product : chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 6702145 - 6704784 bp Length : 2640 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12054807, 12220194; Product type f : factor DNA sequence : ATGAATATCGACAAATATACCGAGCGCGCGCGGGGCTTCATTCAATCGGCGCAGTCTCTGGCGGTGCGCGACGGCCATCA GCAGTTCTCGCCGCTGCATCTCCTGAAAGTCCTGCTCGACGACAGCGAGGGACTCGCGGGCGGTCTGATCGACCGCGCCG GCGGCAATTCGCGCGCGATCCTGAAAGCAACCGAGGACGCGCTCGGCAAGATGCCGAAAGTGTCGGGCAGCGGCGCCGGG CAGATCTACCTGTCCCCGGAATTGGCGCGCGCCTTCGACGCGGCGGAAAAGGCGGCCGAGAAGGCCGGCGACAGTTTCGT CACCGTCGAGCGGCTGCTGCTCGGGCTGACGCTCGACGCCAAGAGCGAGACCGGAAGCATTCTCGCCAAGGGCGGCGTCA CCGCGCAGAACCTCAACGCCGCGATCGAGAGCTTGCGCAAGGGGCGCACGGCCGACTCGGCGACCGCCGAGAACGCCTAT GATGCGCTGAAGAAATATGCCCGCGACCTGACCCAGGCGGCGCGCGACGGCAAGCTCGATCCGGTGATCGGCCGCGACGA GGAGATTCGCCGCACCATTCAAGTTCTCTCCCGGCGCACCAAGAACAATCCCGTGCTGATCGGCGAGCCCGGCGTCGGCA AGACCGCGATCGTCGAGGGCCTCGCGCTGCGCATCGTCAATGGTGATGTGCCGGAGAGCCTGAAGGACAAGCGGCTGCTG TCGCTCGATCTCGGCGCGCTGATTGCGGGTGCCAAATATCGCGGCGAGTTCGAGGAGCGGCTGAAGGCCGTGCTGCAGGA GGTGACGGCGGCCGAAGGCACCTTCGTGCTGTTCATCGACGAGATGCACACCCTGATCGGCGCCGGCAAGGCTGACGGCG CGATGGATGCGTCGAACCTGCTCAAGCCTGCGCTCGCGCGCGGCGAGCTGCACTGCATCGGCGCGACCACGCTCGACGAG TATCAGAAGCATGTCGAGAAGGACGCAGCCCTCGCCCGCCGCTTCCAGCCGGTCTACGTCACCGAGCCCACGGTCGAGGA CACCATCTCGATCCTGCGCGGCCTGAAGGACAAATACGAGCAGCATCACGGCGTGCGCATCACCGATAGCGCGCTGGTGG CCTCGGCCACCTTGTCGAACCGCTACATCACCGACCGCTTCCTGCCCGACAAGGCCATCGACCTGATGGACGAGGCGGCG GCGCGGCTGAAGATGCAGGTCGACTCGAAGCCCGAGGAGCTCGACTCGCTGGATCGCGAGATCATCCGGCTCAAGATCGA ACAGGAGGCCTTGAAGAAGGAGAGCGATCTCGGCTCCAAGACGAGGCTGCAGGCGCTGGAGAAGGAGCTCGCCGATCTTG AGGAGAAGTCGGCCTCGCTGACCGCGAAGTGGAGCGCCGAGAAGGACAAGCTGTCGAACGCGCAGAAGCTCAAGAGCGAG CTGGACGGCTTGCGCATCGAGCTCGCCAACGCGCAGCGCCGCGGCGAGTACCAGAAGGCGGGCGAGCTGGCCTATGGCCG CATCCCCGAGCTGGAGAAGCGGCTCGCCGACATCGAGGCCAAGGAGACCAGCGGCGAGATGATGGAGGAGGCGGTCACCG CCAACCACATCGCGCAGGTGGTCTCGCGCTGGACCGGCGTGCCGGTCGACAAGATGCTCGAGGGCGAGAAGGACAAGCTC TTGCGGATGGAAGACTCGCTAGGCAAACGTGTCGTCGGCCAATTCGAGGCCGTGCATGCGGTCGCGACCGCCGTGCGGCG CTCGCGCGCGGGCCTGCAGGATCCGAACCGGCCGATGGGCTCGTTCATGTTCTTAGGCCCCACCGGCGTCGGCAAGACCG AGCTGACCAAGGCGCTCGCCGAGTATCTGTTCAACGACGAGACCGCGATGGTCCGGCTCGACATGTCCGAGTACATGGAG AAGCACTCGGTGTCGCGGCTGATCGGCGCGCCTCCCGGCTATGTCGGCTATGACGAGGGCGGGGCGCTGACGGAAGCCGT GCGGCGCCGGCCGTACCAGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCATCCGGACGTGTTCAACGTGCTGCTGCAGG TGCTCGACGACGGCCGCCTGACCGATGGCCAGGGCCGCACCGTCGACTTCCGCAACACGCTGATCATCATGACTTCGAAT CTCGGCTCCGAGTTCCTGGTCAATCAGCCCGAGGGCGAGGATACGTCCGAGGTGCGCGAGCTGGTGATGGGCACGGTGCG CGGGCATTTCCGGCCCGAGTTCCTCAACCGCGTCGACGAGATCATCCTGTTCCACCGGCTGCAGAAGAGCGAGATGGGAC GGATCGTCGAGATCCAGTTCTCGCGGCTTCAGAAGCTCCTGGAGGAGCGCAAGATCACGCTCTCGCTCGACGGCGACGCG CGCGACTGGCTCGCCGCCAAGGGCTGGGACCCGGCCTATGGCGCGCGTCCGCTGAAGCGGGTGATCCAGCGCAGCGTGCA GGATCCGCTCGCCGAGATGATCCTCGCCGGCGACATCAAGGATGGCGACAAGGTCGCCATCTCCTCGGAAGGCAACGTGC TGACCTTCAACGGCAAGGCGCATCGCACCGCGGAGATCGCGACGTTCGAGGCGCCGATCCCGAAGCGCAAGCTGAACTGA Protein sequence : MNIDKYTERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDSEGLAGGLIDRAGGNSRAILKATEDALGKMPKVSGSGAG QIYLSPELARAFDAAEKAAEKAGDSFVTVERLLLGLTLDAKSETGSILAKGGVTAQNLNAAIESLRKGRTADSATAENAY DALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKRLL SLDLGALIAGAKYRGEFEERLKAVLQEVTAAEGTFVLFIDEMHTLIGAGKADGAMDASNLLKPALARGELHCIGATTLDE YQKHVEKDAALARRFQPVYVTEPTVEDTISILRGLKDKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAA ARLKMQVDSKPEELDSLDREIIRLKIEQEALKKESDLGSKTRLQALEKELADLEEKSASLTAKWSAEKDKLSNAQKLKSE LDGLRIELANAQRRGEYQKAGELAYGRIPELEKRLADIEAKETSGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKDKL LRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYME KHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSN LGSEFLVNQPEGEDTSEVRELVMGTVRGHFRPEFLNRVDEIILFHRLQKSEMGRIVEIQFSRLQKLLEERKITLSLDGDA RDWLAAKGWDPAYGARPLKRVIQRSVQDPLAEMILAGDIKDGDKVAISSEGNVLTFNGKAHRTAEIATFEAPIPKRKLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-103 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001208279.1 | chaperone | VFG2076 | Protein | 2e-117 | 43 |
| clpB | YP_001208279.1 | chaperone | VFG2084 | Protein | 3e-111 | 43 |
