Gene Information

Name : tnpR (BRADO6397)
Accession : YP_001208241.1
Strain : Bradyrhizobium sp. ORS278
Genome accession: NC_009445
Putative virulence/resistance : Virulence
Product : transposon Tn21 resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 6654768 - 6655373 bp
Length : 606 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 6312271; Product type e : enzyme

DNA sequence : 
GTGACGGGACAGGTTGTCGGTTATGTACGGGTGAGCACACTCGACCAGAAGACCGATCGGCAGCTTGTTGGCGTCGACCT
TCATCGCACCTTCACCGACCACGCCTCCGGTAAAGATACCGATCGGCCCCAGCTTGCCCAGATGATCGCCTATGTGCGCG
AGGGCGACACGGTGGTGGTCCATTCAATGGATCGCTTGGCGCGCAATCTTGAAGATCTGCGGGCCTTGGTGCGGACGCTC
ACCGTGAAGGGCGTCCGCGTGCAGTTCGTGAAGGAGAGCCTCACGTTTACGGCTGAGGCCTCGCCTATGTCCCAGCTGTT
GCTCAACGTCATGGGCTCCTTTGCCGAGTTTGAGCGGGCGCTCATCCGCGAGCGCCAGCGGGAAGGCATCGCAGTGGCCA
AGCGCAAGGGCGTTTATAAAGGGCGTAAGCGCGTTCTCACGCCTGATCAAGTCGCTGAGATCGTCAAGCAGGTCGACGCC
AGGGCGAAGAAGGCCAAGCTTGCCCGCGACTTCGGCGTCAGTCGCGAGACTATTCACCGCTACCTACGGGCTGCGGCTTC
GGCCGCTGCCGCCGAACAAGAACAACAAGAGGAGGAAACTGCATGA

Protein sequence : 
MTGQVVGYVRVSTLDQKTDRQLVGVDLHRTFTDHASGKDTDRPQLAQMIAYVREGDTVVVHSMDRLARNLEDLRALVRTL
TVKGVRVQFVKESLTFTAEASPMSQLLLNVMGSFAEFERALIRERQREGIAVAKRKGVYKGRKRVLTPDQVAEIVKQVDA
RAKKAKLARDFGVSRETIHRYLRAAASAAAAEQEQQEEETA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 5e-50 64
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 5e-50 64
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 7e-50 64
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 9e-50 64
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 8e-48 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpR YP_001208241.1 transposon Tn21 resolvase VFG1030 Protein 2e-50 64