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Name : gspE (BRADO6348) Accession : YP_001208198.1 Strain : Bradyrhizobium sp. ORS278 Genome accession: NC_009445 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 6600458 - 6602110 bp Length : 1653 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9641973, 8096622, 1944223, 1313415, 12024217, 10692359; Product type pt : transporter DNA sequence : ATGAGCGGTATGCTGTCGACCCAGTTTCACGACTATCTCTCCCAGCGCCACCCGCAGGCGGCTGACAGCGGAGCTGCGGG CGAGGCACAGGTCGCGCTCTGGGACAAGTTCGGCCTGAGCGCCGAGGCGTTCGCCGAGGAGGCGGCTCGCTTCACCGGGT TGGAGCGCGTCTCGTTGCGCGAGCTGCTCGCGGCCGTTCCGGCAACGGCAGAGTTCTCCGATCGCTTCCTGCGCGAGGTG GCCGGTTATCCCTATCAGACGCCCGAACGCGTCGCCGTGTTCGCAGTCGCCGATCCGACCGATCAGGCGGTCCGCAGAGC GGCCGAGCTCGTGCTCGGTCCGGCGACGGTCTTCAAGGTCGCCTCGTACGAGGATGTCGCCGTCGTCCTCGACCAGCGCC TCGGCGGCACCGACGATTCGGAAATCTCCCCTCAGCAGGAGCTGCGCGACGACGACGTCGAAAGCCTGCGCGATCTCGCC AGCGGCGCGCCGGTCGTCCGCGCCGTCAACGATCTGATCGAGAAGGCGGTCGAGATGCGCGCCAGCGACATCCACATCGA GCCGTTCTCGACCGGTCTCGTGGTCAGACTGCGCGTCGACGGCCTGCTGCGCCCGATCGCGGCGCCGGCGGGCGTGCTGC CGCAGGCCGTAATCTCGCGCATCAAGATCGTTGCCGGATTGAACATTGCCGAGCGTCGGCTGCCACAGGATGGTGCCGCG CGCATTCGCGCCGGCCGTACCGAGATCGATGTCCGCGTCGCCATCATGCCGACGCAGGCCGGCGAGTCGGCGGTGCTGCG CATCTTGCCCAAGGATCGGTCGCAACTGGTCGCGAATCGTCTGGGGCTGTCCGCGCGGGACGACGCCGCGCTGCGGCGCC TGATCACGCTGCCGCACGGCATGATCGTGATCACCGGACCGACTGGCAGCGGCAAGACCACGACGCTGGCGACGATCCTG TCGATGCTCAACACCCCCGAGCGCAAGATTCTCACCGTCGAGGATCCCGTGGAATACGAGATCCCCGGCATCAACCAGTC GCAGATCAAGCCGGCGATCGGACTGACCTTCGCCAGCGCGCTGCGCTCCTTCGTGCGTCAGGACCCCGATGTCATCATGG TCGGCGAGATCCGAGACAGCGAGACGGCGCATGTCGCCATCCATGCGGCGCTGACCGGCCATCTCGTGCTGACCACGCTG CACACCGAGACGGCGGCAGCCGCGGTGCCGCGGCTGCTCGATCTCGGCGTCGAGGGCTATCTGTTGCGATCGACCCTGCG CGCGGTCATTGCCCAGCGCCTCGTGCGTCAGCTGTGCGAGCACTGCAAGACGGCGCGTCCGCTGGATGAGGCGACGTGCC GGGATGATCCCCGCTACAGCCATGTCGGCCTCGTGCCCGGCGACATCGTCTGGTATCCGGCGGGATGCGAGCGCTGCGGC CACAGCGGCTACCGTGGCCGGGTCGGCGTGTTCGAGCTGCTTGAGCTGACCTCCGGCCTGCGCGAGCTGATCGCCGACAG CGCCGATGGTCTCGCGATCGACCGGCGGGCGATCCAGGAGGGCATGACGACGATGCTCGACGACGGGGTCGCCAAATGCC GCGCCGGCGTCACCTCGGCGTCCGAACTGTTCCGTGTCCTCGTCGTGCGTTGA Protein sequence : MSGMLSTQFHDYLSQRHPQAADSGAAGEAQVALWDKFGLSAEAFAEEAARFTGLERVSLRELLAAVPATAEFSDRFLREV AGYPYQTPERVAVFAVADPTDQAVRRAAELVLGPATVFKVASYEDVAVVLDQRLGGTDDSEISPQQELRDDDVESLRDLA SGAPVVRAVNDLIEKAVEMRASDIHIEPFSTGLVVRLRVDGLLRPIAAPAGVLPQAVISRIKIVAGLNIAERRLPQDGAA RIRAGRTEIDVRVAIMPTQAGESAVLRILPKDRSQLVANRLGLSARDDAALRRLITLPHGMIVITGPTGSGKTTTLATIL SMLNTPERKILTVEDPVEYEIPGINQSQIKPAIGLTFASALRSFVRQDPDVIMVGEIRDSETAHVAIHAALTGHLVLTTL HTETAAAAVPRLLDLGVEGYLLRSTLRAVIAQRLVRQLCEHCKTARPLDEATCRDDPRYSHVGLVPGDIVWYPAGCERCG HSGYRGRVGVFELLELTSGLRELIADSADGLAIDRRAIQEGMTTMLDDGVAKCRAGVTSASELFRVLVVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-68 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-68 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_001208198.1 | general secretion pathway protein E | VFG2426 | Protein | 7e-59 | 48 |
| gspE | YP_001208198.1 | general secretion pathway protein E | VFG2048 | Protein | 7e-68 | 46 |
| gspE | YP_001208198.1 | general secretion pathway protein E | VFG0182 | Protein | 8e-67 | 45 |
| gspE | YP_001208198.1 | general secretion pathway protein E | VFG1876 | Protein | 1e-68 | 45 |
| gspE | YP_001208198.1 | general secretion pathway protein E | VFG1880 | Protein | 7e-69 | 45 |
