|
Name : kpsF (BRADO6245) Accession : YP_001208102.1 Strain : Bradyrhizobium sp. ORS278 Genome accession: NC_009445 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 6490054 - 6491055 bp Length : 1002 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11956197; Product type e : enzyme DNA sequence : ATGCCGAGATCGAAGCCGTTGACCGACGCCACTCCCGCCAACGCGGACGTTCAATCGGCGCTGCGCACGCTCGACGCCGG CAGCAACGGTATTGCCGCGATCGCCGCGGCGCTGCGGGGCCCGTTGGGGGCGGCCTTTGCTGCCGCCGTCGGGCTGATCC GCCAGGCCAAGGGCCGCGCGATTCTCACCGGTCTCGGCAAGTCCGGCCACGTTGCCCGCAAAATGGCGGCCACGCTGGCC TCGACCGGCACGCCGGCGTTCTTCGTCCATTCCGCCGAAGCCGGCCACGGCGATCTCGGCATGATCACCTCCGATGACGT CGTCGTCGCGTTGTCCTGGTCCGGCGAGCAGCCGGAGATGAAGACGTTGGTGAACTACACCAAGCGCTTCGCGATTCCGA TGATCGCGATCACCTCGAACGCGCAGTCGTCGCTGGGGCAGGCGGCGCGGATCGTGCTGGAGCTGCCGAAGGCGCGCGAG GCCTGTCCGCACAATCTCGCGCCGACCACCTCGACCCTGATGCAGGCCGCGATCGGCGACGCGCTCGCGATCGCGCTACT CGAGGGCCGCGGCTTCACCGCGCTCGAATTCGCCAATTTCCATCCGGGCGGCAAGCTCGGCGCCATGCTCAAGCACATCT CCGATCTGATGCGCTCCGGCGACGCGGTGCCGCTGAAGCCGCTGGGTACCGGCATGGCCGATGCGCTGGCGGAGATGTCG GCCAAGGGCCTCGGCTGCGTGGTCATCGTCGACGGCCGCGGCCATGTCGCCGGCATCATCACCGACGGCGATCTGCGCCG TAAGATGCGCGCCGATCTCTTGTCCGTCTCCGTCGACGAGATCATGACCGCCAACCCGCGCACCGTCCGCCGCGAGGCGC TGGCGTCGGAGGCGCTGGAGATCCTCAACTCCGCCAAGATCACCACGCTCATCGTGACCGACGGCGCCAGGCCCGTCGGC ATCCTGCACATGCACGATCTCTTGCGCGCCGGGGTGGCGTGA Protein sequence : MPRSKPLTDATPANADVQSALRTLDAGSNGIAAIAAALRGPLGAAFAAAVGLIRQAKGRAILTGLGKSGHVARKMAATLA STGTPAFFVHSAEAGHGDLGMITSDDVVVALSWSGEQPEMKTLVNYTKRFAIPMIAITSNAQSSLGQAARIVLELPKARE ACPHNLAPTTSTLMQAAIGDALAIALLEGRGFTALEFANFHPGGKLGAMLKHISDLMRSGDAVPLKPLGTGMADALAEMS AKGLGCVVIVDGRGHVAGIITDGDLRRKMRADLLSVSVDEIMTANPRTVRREALASEALEILNSAKITTLIVTDGARPVG ILHMHDLLRAGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 9e-44 | 48 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 4e-44 | 48 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-43 | 48 |
