|
Name : BRADO0628 (BRADO0628) Accession : YP_001202801.1 Strain : Bradyrhizobium sp. ORS278 Genome accession: NC_009445 Putative virulence/resistance : Unknown Product : dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 652370 - 653992 bp Length : 1623 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter DNA sequence : ATGTCTGATCCCGTCGTTGCCATCAAGAATCTCCGGATCGCCTTGCCGAAGGGCGCCGAGCGCGCGCACGCCGTTGATGG CGTCTCGCTCGATCTCACCGCGGGCAAGATCGTCTGCGTTGTCGGCGAGTCCGGCTCGGGCAAGTCGATGTGCGCGCATG CGCTGCTCGGCCTGTTGCCGGAGACGGTGACCGTCGAGAGCGGCGAGATCCGCTTTGACGGCCGCGATCTGCTCGAGGTG GATGAGGACGGCTGGCGCGATCTGCGTGGTCGCCGCATCGCGATGGTGTTCCAGGAGCCGATGACAGCGCTCAATCCGCT GATGCGAATCGGCGACCAATTGATGGAGGTCTTCGAGGCGCATGGATTGCTCTCGCCCGCGGAGCGCCGTGCCAAGGCGC TGGCGCTGGTGCGTGAGGTCGGGCTGCCCGACCCCGAGCGAATCATCCGCGCCTATCCGCATCAGCTCTCCGGCGGCCAG CGCCAGCGCGCGATGATCGCGATGGCGCTCGCGCTCGAGCCGGCGGTGCTCGTCGCCGACGAGCCGACCACCGCGCTCGA CGTGACGACGCAGGCGCAGATCCTCAAGCTGATCCGCAACCTGCAGGCCAGTCACAACATGGCGGTGATGTTCATCACCC ATGATTTCGGCGTCGTCGCCGATATCGCCGATCAGGTCGTGGTGCTGCGCCACGGCAAGGTGGTGGAGGAGGGCTCCGCC GCGAGTGTGCTCGGCAGCCCGCAGCACGACTACACCAAGGCGCTGCTCGCCGCCGTACCGTCCTTCGATCCGCCGCCGCG GTACTCCCGAGAAGACGCGCCAAAGGCGCTCGAGGTGATCGGTCTCGACAAGACCTATGTGACGCCGACCGGCTGGTTCC GGTCAAAGCGCGAGACGCGCGCGGCGCATGCCGTCAATTTCGCCATCCATCAAGGTGAGACGCTTGGCCTCGTCGGCGAA TCCGGGTCAGGAAAATCGTCAGTCGCGCGGCTCGTGATGCGGCTGATCGAGGCCGATCGTGGCACGGTTCGGATCGGCGA TGCCGATCTCACCGGGCTGCAAGGCCGAGCGCTGCGCGCGCAGCGTCATCGCATCCAGATGATCTTTCAGGATCCGTTCG CCTCGCTCAACCCGCGCCGCAAGGTCGGCCGCATCATCGCCGACGGCATGGTCGCGCGCGGTACGGCGCTGGATGCGGCG CTGAAGCGCGCGCAGGATCTGCTCGGACTGGTCGGCCTCGACGCCGGCGCGACCGAGCGCTACCCGCACGAATTCTCCGG CGGCCAGCGCCAGCGCATCGGCATCGCGCGGGCCCTTGCGCTGGATCCGGAGATCATCGTGGCTGATGAGGCGGTGTCCG CGCTCGACGTGTCCGTGCAGGCGCAGGTGCTTCGGCTGTTGGAGGATCTAAAGGCGCGGCTTGGCCTCTCGATGCTGTTC ATCACCCACGATCTGCGCGTCGCCGCGCAGATCTGCGATCGCATTGCGGTGATGCAGAAAGGGGAGATCGTCGAGCTGAA AGCAACGGCCGCGCTGTTTGCAAATCCGGAACACGCCTATACGCGCGAGCTCCTCGCGGCCGTCCCGGGGCGCAAGCCGA AGCTGGCCGCGTTGGATTCGTAA Protein sequence : MSDPVVAIKNLRIALPKGAERAHAVDGVSLDLTAGKIVCVVGESGSGKSMCAHALLGLLPETVTVESGEIRFDGRDLLEV DEDGWRDLRGRRIAMVFQEPMTALNPLMRIGDQLMEVFEAHGLLSPAERRAKALALVREVGLPDPERIIRAYPHQLSGGQ RQRAMIAMALALEPAVLVADEPTTALDVTTQAQILKLIRNLQASHNMAVMFITHDFGVVADIADQVVVLRHGKVVEEGSA ASVLGSPQHDYTKALLAAVPSFDPPPRYSREDAPKALEVIGLDKTYVTPTGWFRSKRETRAAHAVNFAIHQGETLGLVGE SGSGKSSVARLVMRLIEADRGTVRIGDADLTGLQGRALRAQRHRIQMIFQDPFASLNPRRKVGRIIADGMVARGTALDAA LKRAQDLLGLVGLDAGATERYPHEFSGGQRQRIGIARALALDPEIIVADEAVSALDVSVQAQVLRLLEDLKARLGLSMLF ITHDLRVAAQICDRIAVMQKGEIVELKATAALFANPEHAYTRELLAAVPGRKPKLAALDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-98 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-77 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-77 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 9e-77 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-77 | 42 |
