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Name : glcA (BRADO6118) Accession : YP_001207985.1 Strain : Bradyrhizobium sp. ORS278 Genome accession: NC_009445 Putative virulence/resistance : Unknown Product : LctP family glycolate permease Function : - COG functional category : C : Energy production and conversion COG ID : COG1620 EC number : - Position : 6345278 - 6346942 bp Length : 1665 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11283302; Product type t : transporter DNA sequence : ATGTGGAATCAAGTCTACGACCCGTTGGGGAGCCCGGCGCTGTCGACGCTGGCCGCCGCCGTCCCGGTGGTGACGCTGCT GGTGTTGATCGCCAGCGGCAAGGTGAAGGCGCATATCGCCGCGATCATCGCGGTGGTGCTGACCAACATCATCACGATCT TCGTCTTCACCATGCCGGCCAACATGTCGCTGCGCGCAACCGTGCTCGGCGTCGTCACCGGCTTCTTCCCGATCGGCTGG ATCGTGCTGAACGTCATCTTCCTCTACCAGGTGACGGTCTCGACCGGCCGCTTCGAGCTGCTCAAGCGCGCGATCGGCGG TGTGACGGAAGATCGCCGGCTGCAGCTGCTGCTGGTCGCGTTCTCGTTCGGCGCGTTCTTCGAGGGCGCGTCCGGCTTCG GCACGCCGGTGGCGATCACCGGTGCCGTGCTGATCGGCCTCGGCTTCTCGCCGCTCGCCGCCTCCGGCCTGTCGTTGATC GCCAACACCGCGCCGGTCGCCTATGGCGCGCTGGGCACGCCGATCCAGGGCCTCGCCTCGGTCACCGGCCTCGATCCCTA CATCCTCGGCGCGATGGTCGGCCGGCAGCTGCCGGTCTTCTCGCTGATCGTGCCGTTCTGGGTGATCTGGGCGTTCGCCG GCTGGAAGGGCATGAAGGACATCTGGCCCGCGATCCTGGTCACCGGCGTGTCCTTCGCCGTCCCGCAGTTCCTGATCTCG AACTACATCAATCCGTGGATCGTCGACATCGGCGCCTCGCTGATCTCGATGGGCGCGCTGATCCTGTTCCTGAGGGTCTG GCAGCCGAAACAGCTGTGGCTGTCGCCGGCGCTGCGCGGCCGCGACGAATCGGCCGCCACCATGGCGGCCGCCAAGCCGC TCGACCGTACGCCGCTGACGCAGGCCGAGCTGTGGGGCGCGCTGCTGCCCTGGATCATCGTCTGCATCATCATGCTGATC TGGGGTAACGGCGCCTTCAAGAGCTGGGCGAACTCGATCTTCACCTGGAGCTATCCGGTGCCGGAGCTCGACAAGCTGAT CAACAAGATGCCGCCGGTGGCCGCGAAGCCGACGCCCGAGGGCGCGGTGTTCTCGTTCACCTATCTGACCTTCACCGGCA CCGGCATGCTGATCGCGGCGATTATCTCCGGCTTCCTGATGGGCGTCGGACCGGGCAAGCTGATCGCCGAATATGGCCGC ACCATCCGTCTCTGCGCGATCTCGCTGATCACGATCTCGGCGATGCTCGCGATCGGCACGCTCACGCGCCTGTCCGGCGT CGACGCGACGCTGGGCCTCGCCTTCGCCGCGACCGGCGTGCTCTATCCCTTCTTCGGCACTTTGCTCGGCTGGCTGGGCG TGGCGCTGACGGGATCGGACACCGCCTCCAACGTGCTGTTCGGCAATCTGCAGAAGATCACCTCCGAGCAGCTCGGCCTG TCGCCGATCCTGATGGGGGCGGCCAACTCCTCGGGCGGCGTGATGGGCAAGATGATCGACGCGCAATCGATCGTCGTCGC CTCGACCGCCACCAATTGGTACGGCCATGAGAGCTCGATCCTGCGCTACGTCTTCCTGCACTCGATCGTGCTGGCCTGTC TGGTCGGCCTGTTCGTGACCCTGCAGGCCTATGTCTACCCGTTCACCGCGATGGTGCTGAAGTAG Protein sequence : MWNQVYDPLGSPALSTLAAAVPVVTLLVLIASGKVKAHIAAIIAVVLTNIITIFVFTMPANMSLRATVLGVVTGFFPIGW IVLNVIFLYQVTVSTGRFELLKRAIGGVTEDRRLQLLLVAFSFGAFFEGASGFGTPVAITGAVLIGLGFSPLAASGLSLI ANTAPVAYGALGTPIQGLASVTGLDPYILGAMVGRQLPVFSLIVPFWVIWAFAGWKGMKDIWPAILVTGVSFAVPQFLIS NYINPWIVDIGASLISMGALILFLRVWQPKQLWLSPALRGRDESAATMAAAKPLDRTPLTQAELWGALLPWIIVCIIMLI WGNGAFKSWANSIFTWSYPVPELDKLINKMPPVAAKPTPEGAVFSFTYLTFTGTGMLIAAIISGFLMGVGPGKLIAEYGR TIRLCAISLITISAMLAIGTLTRLSGVDATLGLAFAATGVLYPFFGTLLGWLGVALTGSDTASNVLFGNLQKITSEQLGL SPILMGAANSSGGVMGKMIDAQSIVVASTATNWYGHESSILRYVFLHSIVLACLVGLFVTLQAYVYPFTAMVLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 4e-92 | 47 |
