|
Name : kdpA (BRADO5830) Accession : YP_001207711.1 Strain : Bradyrhizobium sp. ORS278 Genome accession: NC_009445 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 6048891 - 6050594 bp Length : 1704 bp Strand : - Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGACCGTCATCGGCTGGATCCAGATCCTGCTTTATTGCGCCGTCGTCGTCGCGCTCGCCAAGCCGCTCGGCTGGTACAT GACGCGAATCTTCAACGGCGAGCGTACGTTCCTCTCTCCGGTGCTGCGACCGGTCGAAGCCGCGATCTACTGGGCCGGCG GCGTCGACGAGCGCCGCGAGCAGCATTGGCTGACCTACACGGTCGCGATGCTGCTGTTCCATGTCGGCGGCTTCCTGATC ATCTACGGCGTGATGCGGCTGCAGGCCGTGCTGCCGTTCAATCCCGCCGGCCAGTCCGCGGTCGCCGAGGACCTGTCGTT CAACACCGCGATCAGCTTCCTCACCAACACCAACTGGCAGAACTACGGCGGCGAGAGCACGCTCTCTTATCTCGTCCAGA TGCTCGGCCTGACGCACCAGAACTTCCTGTCGGCCGCCACCGGCATCGTGCTCGCGATCGCGCTGATCCGCGGCTTCTCG CGTGCCTCTGCGCGCACCGTCGGCAATTTCTGGGTCGATATTACCAGATGCACGCTCTACATCCTGCTGCCGCTGTGCAT CGTCTACACTCTCTTCCTCGTCTGGCAGGGCATCCCGCAGACGCTGGGGCCCTATGTCGAGGCAACGACGCTCGAGGGCG CCAAGCAGACCATCGCGGTCGGGCCGGTGGCCTCGCAGGTCGCGATCAAGATGCTCGGCACCAATGGCGGCGGCTTCTTC AATGCCAATGCCGCGCATCCGTTCGAGAACCCGACCGCGCTGTCGAACTTCATCCAGATGATCTCGATCTTCGCGCTCGG CGCCGCGCTCACCAACGTGTTCGGCCGCATGGTCGGCAACCAGCGCCAGGGCTGGGCGATCCTCGCTGTCATGGGCGTGC TGTTCATCGCCGGCGTCGCCGTCACCTACTGGGCCGAGGCGAGCGGCAGCAATGTGCTGAACGCGCTCGGGCTGACCGGC GGCAACATGGAGGGCAAGGAGGTCCGCTTCGGCATCGTCGCGTCGTCGCTGTTCGCCGTGATCACCACGGCCGCCTCCTG CGGCGCGGTCAACGCGATGCATGACAGCTTCACCGCGCTCGGCGGCATGATCCCGCTGATCAACATGCAGCTCGGCGAGA TCATCGTCGGCGGCGTCGGCGCCGGCCTCTACGGCATGCTGCTGTTCGTGGTGCTCGCGATCTTCGTCGCCGGCCTGATG GTCGGGCGCACGCCGGAATATGTCGGCAAGAAGATCGAGGCCCGCGAGGTCAAGATGGCGATGCTGGCGATCCTGGTCCT GCCGCTGATGTATCTCGGCTGGACCGCGGTCGCCGTCGTGCTGCCGTCGGCCGTGGCATCGATGGCCAATGCCGGACCGC ACGGCTTCACCGAGGTGCTCTACGCCTTCACCTCGGCGACCGCCAACAACGGCTCGGCCTTCGGCGGCCTCACCGGCAAC ACCTTCTTCTACAATCTGACGCTCGCGTCCTCGATGTTCGTCGGCCGCTTCTTCATGATCATCCCGGCGATGGCGATCGC AGGTTCGCTCGCCGAGAAGAAGTCGATCCCGCCGTCCGCCGGCACCTTGCCCACCACTGGCGGGCTGTTCGTCGGCCTGG TCGTCGGCGTCATCCTGATCATCGGCGGCCTCACCTTCTTCCCCGCACTCGCTCTCGGTCCCATCGTCGAGCATCTCGCG ATGACCGCCGGCACGGTGTTCTGA Protein sequence : MTVIGWIQILLYCAVVVALAKPLGWYMTRIFNGERTFLSPVLRPVEAAIYWAGGVDERREQHWLTYTVAMLLFHVGGFLI IYGVMRLQAVLPFNPAGQSAVAEDLSFNTAISFLTNTNWQNYGGESTLSYLVQMLGLTHQNFLSAATGIVLAIALIRGFS RASARTVGNFWVDITRCTLYILLPLCIVYTLFLVWQGIPQTLGPYVEATTLEGAKQTIAVGPVASQVAIKMLGTNGGGFF NANAAHPFENPTALSNFIQMISIFALGAALTNVFGRMVGNQRQGWAILAVMGVLFIAGVAVTYWAEASGSNVLNALGLTG GNMEGKEVRFGIVASSLFAVITTAASCGAVNAMHDSFTALGGMIPLINMQLGEIIVGGVGAGLYGMLLFVVLAIFVAGLM VGRTPEYVGKKIEAREVKMAMLAILVLPLMYLGWTAVAVVLPSAVASMANAGPHGFTEVLYAFTSATANNGSAFGGLTGN TFFYNLTLASSMFVGRFFMIIPAMAIAGSLAEKKSIPPSAGTLPTTGGLFVGLVVGVILIIGGLTFFPALALGPIVEHLA MTAGTVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 2e-78 | 50 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 1e-78 | 50 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 9e-67 | 42 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 2e-66 | 41 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-66 | 41 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-66 | 41 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-66 | 41 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-66 | 41 |
