Gene Information

Name : oxa5 (BRADO4627)
Accession : YP_001206578.1
Strain : Bradyrhizobium sp. ORS278
Genome accession: NC_009445
Putative virulence/resistance : Resistance
Product : beta-lactamase (OXA-5), class D
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2602
EC number : 3.5.2.6
Position : 4817963 - 4818781 bp
Length : 819 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 10427724; Product type e : enzyme

DNA sequence : 
ATGCCGATAATGAGCCGCCGTCACGTGCTTGGCCTGATCGCCGGGGCAGGCCTGTTGCCCGCGCGCACGCTGGCGCATGT
CGCGCCGCCGCGAAACGAGATCCGCCCCTCGCTCGCGCAGCGCTTCACCGATGTGGGGACCAAGGGCACGTTCCTCGCCT
ACAAGGTCGAGGAATATCTCATCATCGCCAGCGACACTGAGCGCTCGGGCGAGGCGAGGCTGCCGGCCTCGACCTTCAAG
ATCGCCAACTCGTTGATCGCGCTGGACACCGGCGTCGTCGAGGATCCCGACAAGGATGTGTTCAAGTGGGACGGCGTCAT
CAGACCGATCGAGGCCTGGAACAAGGATCACACCCTGCGCAGCGCGATCGCCGTCTCTGCCGTGCCGGTCTATCAGGAGA
TCGCGCGCCGGATCGGGCCCGAGCGGATGCAGAAATATCTCGAGGAGCTCGACTACGGCAATCACGACATTGGCGGCGGC
ATCGATCAGTTCTGGCTGACTGGGAGCTTGCGCATCGATCCGGTCGAGCAGGTCGATTTCATCGACCGCCTCCGGCGCGG
CGCGCTGCCGGTCTCCAAGCGCAGCCAGGACCTGACGCGCGACATCATCCCGGTGACCAAGGGCGGCGACGCCGTCATTC
ACGCGAAGTCGGGCTTGCTGGGAAAAGAGCAGGGCTCGCTCGGCTGGATGGTGGGCTGGGTCGACAAGGGCGACCAGCCG
ACCGTGTTCGCGATGAACATGGACTGCCCCGAGCCGCGCCACGTCGAGGCCCGGATGACGCTGACGCAGGCGTGCCTCAA
GGACATCGGCGCAATTTAG

Protein sequence : 
MPIMSRRHVLGLIAGAGLLPARTLAHVAPPRNEIRPSLAQRFTDVGTKGTFLAYKVEEYLIIASDTERSGEARLPASTFK
IANSLIALDTGVVEDPDKDVFKWDGVIRPIEAWNKDHTLRSAIAVSAVPVYQEIARRIGPERMQKYLEELDYGNHDIGGG
IDQFWLTGSLRIDPVEQVDFIDRLRRGALPVSKRSQDLTRDIIPVTKGGDAVIHAKSGLLGKEQGSLGWMVGWVDKGDQP
TVFAMNMDCPEPRHVEARMTLTQACLKDIGAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaOXA-129 AET25386.1 OXA-129 beta-lactamase Not tested PAGI-2(C) Protein 4e-45 43
bla OXA-129 AFG30109.1 OXA-129 beta-lactamase Not tested PAGI-2 Protein 4e-45 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
oxa5 YP_001206578.1 beta-lactamase (OXA-5), class D HQ700343.1.gene1.p01 Protein 7e-43 43
oxa5 YP_001206578.1 beta-lactamase (OXA-5), class D JN205800.1.gene6.p01 Protein 5e-44 43
oxa5 YP_001206578.1 beta-lactamase (OXA-5), class D AY500137.1.gene1.p01 Protein 2e-44 43
oxa5 YP_001206578.1 beta-lactamase (OXA-5), class D HM015773.1.gene6.p01 Protein 3e-44 43
oxa5 YP_001206578.1 beta-lactamase (OXA-5), class D AM932669.1.gene2.p01 Protein 2e-45 43
oxa5 YP_001206578.1 beta-lactamase (OXA-5), class D X58272.1.gene1.p01 Protein 1e-44 42
oxa5 YP_001206578.1 beta-lactamase (OXA-5), class D X75562.1.gene1.p01 Protein 2e-43 41
oxa5 YP_001206578.1 beta-lactamase (OXA-5), class D AY343493.1.gene1.p01 Protein 3e-42 41