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Name : serS (BRADO4044) Accession : YP_001206021.1 Strain : Bradyrhizobium sp. ORS278 Genome accession: NC_009445 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 4231910 - 4233238 bp Length : 1329 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCACGACATCAAATCGATCCGCGACAATCCGCAAGATTTCGATGCAGCGCTGACTCGCCGGGGTCTGTCGCCGCTGTC GTCGCAGCTGCTCGCCATCGACGAGCGCCGCCGCGCGGCGATCCTGGCGTCGGAGCAGGCGCAGGCGCGGCGCAACGCGG CCTCCAGGGAGATCGGCGAGGCCAAGAAGGCCAAGGACGAGGGACGCGCGTCCGCGCTGATGGAGGAGGTCGCCAAGCTC AAGACCACGATGCCGGAGCTCGAGGCGGCTGCGAAGCAGGCCGACGAGGAGCTGGCGCGCGAGCTGTCGGCGATCCCCAA TCTTCCGCTCGACGAGGTGCCGGACGGCAAGGACGAGCATGACAACGTCGAGCGTCATGTGTTTGGCGCCCGCCGCAACT ACGCCTTCGCGCCCAAGGCGCATGACGATATCGGGACGGCTCTTGGCATGGACTTCGAGTCGGCGGCGAAGCTGTCCGGC GCGCGCTTCGTCGTGCTGAAGAAGGGGCTCGCGCGACTCGAGCGCGCGATCGGGCAGTTCATGCTCGACCTCCACACCAC CGAGCATGGCTACACCGAGGTCAACCCGCCGCTCCTGGTGCGCAACGACGTCATGTTCGGCACCGGCCAATTGCCGAAGT TCGAGGACGACCAGTTCTGGGCGGTCAGGGGCGAGCTGCTGATCGCGCCCGATGAGCGTCTGAAGGCCGAACGGCTCGGT CTCATTCCCACCGCCGAGGTCGCGCTCACAAACCTCGTGCGCGAATCGATCGTCGACGAAAAGGAGCTGCCGATGCGGCT CACCGCGCTCACGCCGTGCTTCCGCGCCGAGGCCGGCGCGGCTGGGCGCGACACCCGCGGCATGATCCGGCAGCATCAGT TCACCAAGGTGGAGCTGGTCTCGATCACGACGCCGGAGACGAGCAAGGACGAGCACGAGCGGATGCTGGCCTGCGCCGAG GAGGTGCTGCGCCGGCTCGATCTGCACTACCGCGTGATCACGCTGTGCACCGGCGACATGGGCTTCTCGTCGCAGAAGAC CTACGACATCGAGGTCTGGATGCCCGGGCAGGGCGACGGCGGCGCCTTCCGCGAGATCTCCAGCTGTTCGGTCTGCGGCG ACTTCCAGGCCCGCCGCATGGATGCGCGCTATCGCGCCAGCGACGGCAAGCCGCGCTTCGTGCACACATTGAACGGCTCG GGCACGGCCGTCGGTCGCGCGTTGATCGCTGTGATGGAGACCTATCAGCAGGCCGACGGCTCGATCGCCGTGCCGGACGT GTTGCAGCCCTACATGGGGGGCCTCAAGGTCGTTGCCGCGGATTCATAG Protein sequence : MHDIKSIRDNPQDFDAALTRRGLSPLSSQLLAIDERRRAAILASEQAQARRNAASREIGEAKKAKDEGRASALMEEVAKL KTTMPELEAAAKQADEELARELSAIPNLPLDEVPDGKDEHDNVERHVFGARRNYAFAPKAHDDIGTALGMDFESAAKLSG ARFVVLKKGLARLERAIGQFMLDLHTTEHGYTEVNPPLLVRNDVMFGTGQLPKFEDDQFWAVRGELLIAPDERLKAERLG LIPTAEVALTNLVRESIVDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDEHERMLACAE EVLRRLDLHYRVITLCTGDMGFSSQKTYDIEVWMPGQGDGGAFREISSCSVCGDFQARRMDARYRASDGKPRFVHTLNGS GTAVGRALIAVMETYQQADGSIAVPDVLQPYMGGLKVVAADS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-94 | 49 |
