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Name : BRADO3268 (BRADO3268) Accession : YP_001205295.1 Strain : Bradyrhizobium sp. ORS278 Genome accession: NC_009445 Putative virulence/resistance : Resistance Product : tetracycline-efflux transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 3467867 - 3469144 bp Length : 1278 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter DNA sequence : ATGCTCCGTCCCGACGACACGACATCCGACGACACGATCTTGAATAACACGGCACCGCCGCAGGCGCCGCGCCGTGGCGC GGTCGCCTTCATCTTCGTCACCATCCTGCTCGACATGCTCGCGCTCGGGCTGATCATGCCGATCCTGCCGAAGCTGATCG AGGGCTTCGTCGGCAACGACACGGCGCAGGCCGCGCGGATCTTCGGGCTGTTCGGGACGGCCTGGGCGTTGATGCAGTTG GTGTTCTCGCCGGTGCTCGGCAGCCTGTCCGACCGGTTCGGGCGGCGGCCCGTCATCCTGCTGTCGAATTTCGGCCTCGC CGCCGACTACGTGCTGATGGCGCTGGCGCCGTCGCTCGCCTGGCTGTTCCTCGGGCGGCTGATTTCCGGCGTCACCTCAG CCAGCATCTCCACGGCGTTTGCCTACATCTCCGATCTCACGCCGCCGGACCGCCGGGCCGCCGTGTTCGGCCGCATCGGG GCGGCGTTCGGCGCCGGCTTCGTGCTCGGTCCCGCGACTGGCGGTCTGCTCGGCGACATCGATCCGCGGCTGCCGTTCTG GGCGGCGGCCGGGCTGAGCTTCGCCAATGCGCTCTATGGCCTGCTGGTGCTGCCGGAATCGCTGCCGGCCGAACGTCGCA GCGCGTTCCGCTGGCGCGCGGCGAACCCGCTGGGGGCGCTGCGCTTGCTGCGCTCGGAGCGGACATTGGCGGGCTTGTCG CTGGTCAACTTCATCACCCAGCTCGCCCATGTGGTGCTGCCGTCGACCTTCGTGCTGTACGCGACCTATCGCTATGGGTG GGACACGCGCACGGTCGGCCTGACGCTCGCGATCGTCGGCGTCTGCGCAATGGTGGTGCAGGGCGGCGCCGTCGGCTTCA TCGTGCGCAGGCTCGGCGAGCGCGGCGCGCTGATGCTCGGATTGTCCGCGGGCACGGTCGGGTTCCTGATCTTCGGCCTG GCGCCAACGGGGATGCTGAGCTGGACGGGCATTCCCGCGATGGCGCTGTGGGGCGTGTCGGGTGCGGCGATCCAGGCGTT GATGACGCGGCTGGTTCCGCCGGACCGGCAAGGCCAGCTGCAGGGCGCGACGTCGAGCGTGCAGAGCATGGCGCAACTCG CGGGGCCGTTCCTGTTCACGCTGACGTTTGCGTATTTCATCGGCGCCGGCGCGCCGCTGCATCTGCCGGGCGCGCCGTTC CTGCTGGCCTCGGCGCTGCTGATCGTGGCGCTCGTCATCGCGGTGCGGGCGCTGCGCGCGGAGGAAAGAAAGTCATGA Protein sequence : MLRPDDTTSDDTILNNTAPPQAPRRGAVAFIFVTILLDMLALGLIMPILPKLIEGFVGNDTAQAARIFGLFGTAWALMQL VFSPVLGSLSDRFGRRPVILLSNFGLAADYVLMALAPSLAWLFLGRLISGVTSASISTAFAYISDLTPPDRRAAVFGRIG AAFGAGFVLGPATGGLLGDIDPRLPFWAAAGLSFANALYGLLVLPESLPAERRSAFRWRAANPLGALRLLRSERTLAGLS LVNFITQLAHVVLPSTFVLYATYRYGWDTRTVGLTLAIVGVCAMVVQGGAVGFIVRRLGERGALMLGLSAGTVGFLIFGL APTGMLSWTGIPAMALWGVSGAAIQALMTRLVPPDRQGQLQGATSSVQSMAQLAGPFLFTLTFAYFIGAGAPLHLPGAPF LLASALLIVALVIAVRALRAEERKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 2e-40 | 43 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-40 | 43 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-40 | 43 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-40 | 43 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 4e-41 | 41 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 3e-41 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BRADO3268 | YP_001205295.1 | tetracycline-efflux transporter | NC_011586.7045189.p0 | Protein | 1e-37 | 43 |
| BRADO3268 | YP_001205295.1 | tetracycline-efflux transporter | AY264780.2.gene3.p01 | Protein | 2e-45 | 43 |
| BRADO3268 | YP_001205295.1 | tetracycline-efflux transporter | X75761.gene.p01 | Protein | 3e-40 | 42 |
| BRADO3268 | YP_001205295.1 | tetracycline-efflux transporter | AF534183.gene.p01 | Protein | 2e-41 | 41 |
| BRADO3268 | YP_001205295.1 | tetracycline-efflux transporter | NC_010410.6002597.p0 | Protein | 2e-41 | 41 |
| BRADO3268 | YP_001205295.1 | tetracycline-efflux transporter | CP001485.1.gene2821. | Protein | 2e-41 | 41 |
