Gene Information

Name : BRADO2620 (BRADO2620)
Accession : YP_001204675.1
Strain : Bradyrhizobium sp. ORS278
Genome accession: NC_009445
Putative virulence/resistance : Unknown
Product : ABC transporter ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : 3.6.3.-
Position : 2808991 - 2810592 bp
Length : 1602 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 1766370; Product type t : transporter

DNA sequence :
ATGACGGCGCCGTTGTTGCAGATCGAGGGGCTGGGCATCGCGAGCGCAGCCGGCACGCCGATCGTCGATGGCATCTCGTT
GGAGATCGGACGCGGCGAGTTCTTGGCCGTGGTCGGCGAGTCCGGCAGCGGCAAGACAGCGGCGGCGCGCGCCGTGCTGG
GACTGCTGCCCGCGGGGCTGGTGCGCAGCCAAGGACGCATCCTGCTGGATGGCGAGGATTTGACGAGGCTGTCGCAGCGG
CAGCTGCGCGCGCTGCGTGGCCCCGCGATTGGTATGGTGTTCCAGGAGCCGATGGTGTCGCTCAATCCGGCGCTCACGAT
CGGCGCCCAGATGATGGAGGGGTTGCTGCTGCACGAGCGCCTCGCACGGAAGGAGGCGCGCCGGCGCTGCCTGGACATGC
TGGCGCGGGTGCAGATCCGCGATCCCCTCCGGACCTTCAGCGCCTATCCGCACGAATTCTCCGGCGGCATGCGCCAGCGC
ATCATGCTGGCCTCGGTCATGCTGCTGCGGCCGAAATTGTTGATCGCGGACGAGCCGACGACCGCGCTCGATACGCTGAC
CCAGCGCGAGGTGCTGGACCTGATGGTGGCGCTGGCGCGCGATCATGGCACAGCGGTGATGCTGATCACCCATAATCTCG
GTCTGGTGGCGCGTTATGCGCAGCGCGCCGTCGTGATGTGCCGCGGCCGGATGGTCGAAACAGGTACGGCGCAGCAGATC
CTGACGGCGCCGCGCGCAAGCTATACGCGCGAGCTGGTCGAGGCGTTGCCGCGCCGTGCGGCGGCGCGCCGCGCCGCGGC
GGCAGACGACCTAATAATGGCGGTCCGCGGCTTGAAGGTGACGTTCCCCGGCCGTCAGCGGCTGTTCCGGCGCGATGCCG
GATTGATGGCCGTCAACGGCGTTGATCTCTCGATACGCGCCGGCGAAACCGTCGCGGTGGTCGGCGGCAGCGGCTCGGGC
AAGACCACGCTGGGCCGCGCGATGCTGCGGCTGTTGCCGCTCGCGGGCGGCGAGGTTCACTTTCTCGGCCGCGACGTGAC
TTCGGCGATCGATGCTGATTTCCGCCTCGCCGCGCAGCTAGTGTTCCAGGATCCGTACTCCTCGCTCGACCCGCGCATGC
GCATCGGCGACATCGTGGCCGAGCCGCTCCGTCATACGTCGCTCACGACAGCGGAACGTGCGGGCCGGGTGACGACGATG
CTGGAGGAGGTGGGGCTCTCCGGCCTTGCGCAGCGCTGGCCGCACGAATTGTCCGGCGGGCAGCGCCAGCGGGTGGCGAT
CGCGCGGGCAATCATCCGCCGCCCCGCCTTCGTCGTGGCCGACGAGCCGGTATCGGCCCTGGACATGACGATCCAGGCGC
AGGTCTTGAAGCTGTTCGAGAGGCTGCAGGCGCAATACGGCTTTGCCTGCCTGTTCATCAGCCACGATCTCGCCGCGGTC
GAACAGGTCGCCGACCGCGTCGTCGTGATGCAGGCCGGGCAGATCGTGGAGCAGGGTAGCCGGGACGACGTATTCGACCG
GCCGCAGCACGACTACACCAAGGCGCTGCTTGCGGCGGCACCGATCGTGGCGTTTTCCGATCGCGAGCCGGCGCCCGCCT
GA

Protein sequence :
MTAPLLQIEGLGIASAAGTPIVDGISLEIGRGEFLAVVGESGSGKTAAARAVLGLLPAGLVRSQGRILLDGEDLTRLSQR
QLRALRGPAIGMVFQEPMVSLNPALTIGAQMMEGLLLHERLARKEARRRCLDMLARVQIRDPLRTFSAYPHEFSGGMRQR
IMLASVMLLRPKLLIADEPTTALDTLTQREVLDLMVALARDHGTAVMLITHNLGLVARYAQRAVVMCRGRMVETGTAQQI
LTAPRASYTRELVEALPRRAAARRAAAADDLIMAVRGLKVTFPGRQRLFRRDAGLMAVNGVDLSIRAGETVAVVGGSGSG
KTTLGRAMLRLLPLAGGEVHFLGRDVTSAIDADFRLAAQLVFQDPYSSLDPRMRIGDIVAEPLRHTSLTTAERAGRVTTM
LEEVGLSGLAQRWPHELSGGQRQRVAIARAIIRRPAFVVADEPVSALDMTIQAQVLKLFERLQAQYGFACLFISHDLAAV
EQVADRVVVMQAGQIVEQGSRDDVFDRPQHDYTKALLAAAPIVAFSDREPAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 7e-71 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-71 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-71 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-71 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-82 43