Gene Information

Name : rph (BRADO0173)
Accession : YP_001202389.1
Strain : Bradyrhizobium sp. ORS278
Genome accession: NC_009445
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 185987 - 186700 bp
Length : 714 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGGCCGAGCCGCCGTGCACCGGACGAAATGCGGGCCGTGAGCCTGGAACGAGGCGTCGTGAAATACGCCGAGGGCTC
CTGCCTGGTGAAGTTCGGCGACACCCATGTGCTGGTCACCGCGACCCTGGAGGACCGGCTGCCGCCCTGGCTCAAGGGGC
AGGGCCGCGGCTGGATCACCGCCGAATACGGCATGCTGCCGCGCGCCACCCTGGAGCGCACCCGCCGCGAGGCGTCAGCC
GGCAAGCAGACCGGCCGCACGGTCGAGATCCAGCGCCTGATCGGCCGCTCGCTGCGCACCGCAATCGACCTGGAAGCGCT
CGGCGAGCGCCAGATCACGGTCGATTGCGACGTGCTGCAGGCCGATGGCGGCACCCGCACCGCTTCGATCACCGGCGCCT
GGGTGGCGTTGGCCGACTGCATCCGCTGGATGAAGGCGCGCAACATGATCAAGACCGAGGTGCTGCGTACCAACGTCGCC
GCGGTCTCGTGCGGCATCTACAACGGCACGCCGGTGCTCGACCTCGACTATGCCGAGGATTCCGAGGCCGAGACCGACGC
CAATTTCGTCATGACCGGCGACGGCCGCATCATCGAGGTGCAGGGCACCGCCGAGAAGACCCCGTTCAGCGAGGCCGAGT
TCCTCGCGCTGATGGCGCTGGCGCGCAAGGGCGTCGGCCGGCTGGTCGACCTGCAGAAGATGGCGGTCGCGTGA

Protein sequence :
MRPSRRAPDEMRAVSLERGVVKYAEGSCLVKFGDTHVLVTATLEDRLPPWLKGQGRGWITAEYGMLPRATLERTRREASA
GKQTGRTVEIQRLIGRSLRTAIDLEALGERQITVDCDVLQADGGTRTASITGAWVALADCIRWMKARNMIKTEVLRTNVA
AVSCGIYNGTPVLDLDYAEDSEAETDANFVMTGDGRIIEVQGTAEKTPFSEAEFLALMALARKGVGRLVDLQKMAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-49 50