|
Name : cbbT (BRADO1657) Accession : YP_001203772.1 Strain : Bradyrhizobium sp. ORS278 Genome accession: NC_009445 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1774442 - 1776454 bp Length : 2013 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : GTGCAAAAGGCAGCCGCCAAAGTTGATCCGGCCCACGCCGAAATGGCGAACGCGATCCGCTTCCTGGCCATCGATGCCGT GGAGAAGGCGAAGTCGGGTCACCCCGGCATGCCGATGGGCATGGCCGACGTCGCGACCGTGCTGTTCTCCCGCTTCATGA AGTTCGATCCGGCCGACCCCGCCTGGCCCGATCGCGACCGCTTCGTGCTGTCGGCCGGCCACGGATCGATGCTGCTCTAC GCGCTGCTGCATCTCACGGGCTATGAGGCGGTCACGATCGACGAAATCAAGGCGTTCCGGCAATGGGGCGCCAAGACGCC GGGGCATCCGGAATATGGTCACACGCCGGGCGTCGAAACGACCACGGGGCCGCTGGGGCAGGGCATCGCGACAGCCGTTG GCATGGCGCTCGCCGAGCGCCTGATGAACGCGCGCTATGGCGACGAATTGGTCGATCACTACACTTATGTCATCGCCGGC GATGGTTGCCTGATGGAGGGCATCAGCCATGAGGCGATCTCGCTTGCCGGCCATCTCCGGCTCAACCGACTGATCGTGCT GTTCGACGACAACGGCATCTCGATCGACGGCTCGACCGGGCTCGCGTGTTCCGACGATCAGCCCGCGCGTTTCGCCGCCT CGGGCTGGGCGACCAGCCGCATCGACGGCCATGATCCCCAGGCGATCGAAGCCGCCATCGCCGCCGCGCGGCAGAGCGAC CGCCCGAGCATGATCGCGTGCCGCACCACGATCGGCTTCGGCTCGCCGGGACGGCAGGGCTCGGAGAAGGCGCATGGCGC GCCGCTCGGGCCGGAGGAGGTCGACAAGACCCGCGCCGCGCTGCACTGGCCGCACCGGCCGTTCGAAGTTCCGGCCGATG TTCTGGTCAGCTGGCGCGAGATCGGCGCGCGTGGCCGCAGCGTCCGCCAGGCCTGGAAGGAGCGCGCGCGCAAGCTCGGC ACGGCCGACCGCTCGCCCTGTCACGATGCGCTGAACAAGAAACTGCCGGCGGCCTACATCGAGCGCATGGCGCAATTCAT CGCGCAGTTGACGGTTGAGAAGCCGAAGATCGCCACGCGTCAGGCGTCGCAGAACGTCATCGACGTGATCGCGACGGTGC TGCCGAATTTGCTCGGCGGCTCGGCGGACCTGACCCACTCCAACCTGACCAAGGCGAAGACGCACAAATCAGTGACGCCG TCGAGCATGGACGGCAACTACGTCCATTACGGTGTGCGCGAGCACGCGATGGCCGCGGCCATGAACGGCGTCGCGCTGCA TGGCGGCTTCATTCCCTATGGCGGCACCTTCCTGGCGTTTGCCGACTACAACCGGCCGGCCATCCGTCTCGCCGCGCTGA TGGGCATCCGCGTCATTCACGTGATGACGCACGACTCCATTGGTCTCGGCGAGGATGGCCCGACGCACCAGCCAGTCGAG CATGTCCCGAGCCTGCGCGCCATTCCCAATCTCCTGGTGTTTCGTCCGGCCGATGCCGTCGAGACCGCGGAAGCCTGGGA TTGTGCGCTCCGGGCCGAGACGTCGCCATCCGTGCTGTGCCTGTCACGTCAGGCGCTGCCGGCCTTCCGCACCGAGGCCT CGGATCACAACAAGGTGGCGCTCGGCGCCTATGTTGTGGTCGAGCCGGATGGCGGCCGTAACGTCACGTTGATCGCGACC GGGTCGGAAGTGGCGATTGCACTGGAGGCGGCAAAGCTGCTGGCGGCGGAGAATGTCCGCGCGGCCGTGGTGTCGGCACC TTGCTTCGAACTGTTCCGCAAGCAAAGCGCGGAGTATCGCGCGGACGTGCTCGGCAGCGCGCCGCGGATCGGCGTCGAGG CCGCCATCGAGGGCGAGTGGGCGCGCTGGCTCGGCGATGCCGGTGAGTTCGTCGGCATGCACGGCTTCGGCGCCTCCGCG CCGGCCGATGTGCTGTACCGCGAGTTCGGCATCACGCCGGCAGCCGTCGTGGACGCCGCCAAGCGCAACATCACCCGGTC GCGCGCGTCCTGA Protein sequence : MQKAAAKVDPAHAEMANAIRFLAIDAVEKAKSGHPGMPMGMADVATVLFSRFMKFDPADPAWPDRDRFVLSAGHGSMLLY ALLHLTGYEAVTIDEIKAFRQWGAKTPGHPEYGHTPGVETTTGPLGQGIATAVGMALAERLMNARYGDELVDHYTYVIAG DGCLMEGISHEAISLAGHLRLNRLIVLFDDNGISIDGSTGLACSDDQPARFAASGWATSRIDGHDPQAIEAAIAAARQSD RPSMIACRTTIGFGSPGRQGSEKAHGAPLGPEEVDKTRAALHWPHRPFEVPADVLVSWREIGARGRSVRQAWKERARKLG TADRSPCHDALNKKLPAAYIERMAQFIAQLTVEKPKIATRQASQNVIDVIATVLPNLLGGSADLTHSNLTKAKTHKSVTP SSMDGNYVHYGVREHAMAAAMNGVALHGGFIPYGGTFLAFADYNRPAIRLAALMGIRVIHVMTHDSIGLGEDGPTHQPVE HVPSLRAIPNLLVFRPADAVETAEAWDCALRAETSPSVLCLSRQALPAFRTEASDHNKVALGAYVVVEPDGGRNVTLIAT GSEVAIALEAAKLLAAENVRAAVVSAPCFELFRKQSAEYRADVLGSAPRIGVEAAIEGEWARWLGDAGEFVGMHGFGASA PADVLYREFGITPAAVVDAAKRNITRSRAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-144 | 51 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-137 | 49 |
