Gene Information

Name : BRADO1408 (BRADO1408)
Accession : YP_001203538.1
Strain : Bradyrhizobium sp. ORS278
Genome accession: NC_009445
Putative virulence/resistance : Virulence
Product : OmpR family two component response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1507791 - 1508456 bp
Length : 666 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : regulator

DNA sequence : 
TTGCGCATCCTGCTGGTGGAAGACACGCCCGAGATCGGCGCCGCCGTGACCAGCCGGTTCGAGCGGATCGGCTACGCCGT
CGACTGGGAGAAGGACGGTCGCACCGCGAGCGAGCTGATCGAGGTGCAGACCTATGACCTCATTGTGCTCGACGTAATGC
TGCCGAACATGGACGGCTTTGCCGTGCTCAAGCACTTGCGCAAGCGCGGCCTGCGCACCCCGGTGCTGGTGCTGACGGCG
CGCTCGGCGGTCGACGACCGGATCGGCGCGCTCGACCTCGGTGCCGACGACTATCTCATCAAACCGTTCGACTATCGCGA
GCTGGAGGCGCGAGCGCGCGCCCTACTCCGCCGCGCCGCCGGCCAATCCGACAATCTGCTGACATTGGGGCCGCTGGTGA
TCGACCGCGCCGGCCGGACCGCGAGCGTCGCCGGCCAGCCGCTCGACCTGACGCGGCGCGAGCTGACCGTGCTGGAGATC
CTCGCTGCACGCCCCGGGCGCTACGTCGCCAAAGAGGAACTGGTCGAGCAGCTGTTCAGCTTCGACCAGGATCCGAGCCC
GAACGCCGTCGAGCAGTTCATCGCGCGTCTCAGGCGCAAGCTGGCGGCCACGTCCGTCGAGATCAAGACCGAGCGCGGCC
TTGGCTATCAGCTCCACGCTTCGTGA

Protein sequence : 
MRILLVEDTPEIGAAVTSRFERIGYAVDWEKDGRTASELIEVQTYDLIVLDVMLPNMDGFAVLKHLRKRGLRTPVLVLTA
RSAVDDRIGALDLGADDYLIKPFDYRELEARARALLRRAAGQSDNLLTLGPLVIDRAGRTASVAGQPLDLTRRELTVLEI
LAARPGRYVAKEELVEQLFSFDQDPSPNAVEQFIARLRRKLAATSVEIKTERGLGYQLHAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BRADO1408 YP_001203538.1 OmpR family two component response transcriptional regulator BAC0197 Protein 9e-30 42
BRADO1408 YP_001203538.1 OmpR family two component response transcriptional regulator BAC0083 Protein 2e-26 41
BRADO1408 YP_001203538.1 OmpR family two component response transcriptional regulator NC_002516.2.879194.p Protein 1e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BRADO1408 YP_001203538.1 OmpR family two component response transcriptional regulator VFG0473 Protein 3e-26 41