Gene Information

Name : SSU98_0898 (SSU98_0898)
Accession : YP_001200456.1
Strain : Streptococcus suis 98HAH33
Genome accession: NC_009443
Putative virulence/resistance : Virulence
Product : ScnF
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 863806 - 864687 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence :
ATGTTATTAGAAATCAATCATTTAAAAAAAGTTTACAAAAACTTTCCCACTGTTGATTTGGAAAAAATTACTGTACGAAA
AGGAAAAATCTACGGTTTTCTTGGACCAAATGGTGCAGGTAAAACAACTACAATAAAAATGATTCTATCACTTGTCACTC
CGACTTCAGGTGAATTTTTTATTAATAAAAAAGACTTTCGAAATGACAAAAAATACCTAAATCAGATTGGATCTATGATA
GAAGAACCGTCCTATTATCCTAATTTAACTGGATATGAAAATTTATTAGTGTTTCAAAAAATGGTGGGATTTGATAAAAA
TAATATCCGGCCAACATTGGAGCTCGTTGGATTAGCTGATGAAAAAAATCGAAAAAAATTAGTTAAGGCCTATTCTCTTG
GTATGAAACAGCGACTTGCCTTAGCATTTGCTTTAGTGAAAAAGCCGAAAATCTTATTATTAGATGAGCCCACAAATGGT
CTTGATCCAGCTGGTATTCATGAAATTCGTGAATTAATTGTTCAATTAGCCAAAGAAAAAGGTCTGACTGTCTTTATTTC
CAGTCACATTCTTCCGGAAATTGAACACATTGCAGATCGAGTTGGGATTATCAATCATGGTCGTCTTGTCTATGAGGGAG
AAATTGAAGCTATTAAGTCAAATACTTGGATTGAAATTGGCGGTGATTTTTCACAGAAAAATATTGTTCAGACCTTAGTT
GAACTTGGAACGGTAGAAATTTTGAGTGCATCCGAAAGTCAAGTAACTTTAAGGGATTTGGATAACGATCGGTTAGCAGA
TCTGGTGAGCTATTTAATAGAAAATGGATACCGAATATTCCGAGTGGTTAGAGAAAGTGAAACTCTGAAGATATTTTCCT
AA

Protein sequence :
MLLEINHLKKVYKNFPTVDLEKITVRKGKIYGFLGPNGAGKTTTIKMILSLVTPTSGEFFINKKDFRNDKKYLNQIGSMI
EEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVGLADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNG
LDPAGIHEIRELIVQLAKEKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQTLV
ELGTVEILSASESQVTLRDLDNDRLADLVSYLIENGYRIFRVVRESETLKIFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 4e-80 62
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 1e-43 50
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 1e-43 50
cdd4 CAA63569.1 - Not tested PaLoc Protein 4e-49 49
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 4e-26 44
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 4e-26 44
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 4e-26 44
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 4e-26 44
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 5e-31 43