Gene Information

Name : SSU98_0894 (SSU98_0894)
Accession : YP_001200452.1
Strain : Streptococcus suis 98HAH33
Genome accession: NC_009443
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 861412 - 862164 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence : 
ATGTTATTAGAAATCAATCATTTAGAAAAAGTTTACCGCACGCGCTTTTCAAAAGAGGAAACTCGTGCCTTGCAAGATGT
GGATTTTAAGGTAGAAGAGGGCGAGTTTATCGCTATCATGGGGGAAAGTGGTTCTGGTAAGACGACTTTGCTCAACATTC
TAGCAACCCTGGACAAGCCGACGAGGGGCTCTGTTATCTTAAACAATCAAGACATCACCAAAATCAAGGAAAGCAAGCTG
GCAGATTTCCGTTTGCGTAATCTTGGCTTTGTCTTCCAAGATTTTAACCTCTTGGACACCCTGTCCATCCAAGACAATAT
CTTTTTACCTCTGGTATTGGCACGTGAGAGCTATCAGGAAATGGAGAAACGGTTGGAAGTATTGGCACCAAAACTACGGA
TTCAAGATTTGCTGAAAAAACGTCCCTTTGAACTTTCTGGTGGACAAAAGCAGCGCGTGGCTATTGCTCGTAGTTTGATT
ACCCAGCCACAGATTGTCCTAGCGGACGAACCGACGGCTGCCCTAGATTATCGCAATTCGGAAGACTTGCTGAATTTGTT
TGAAGAGATTAACCGTGACGGGCAAACTATTCTCATGGTGACCCACTCGGCCAACGCAGCCAGCCACGCCAAACGTGTCT
TGTTTATCAAAGATGGTCGTATTTTCCATCAACTGTACAAGGCAGACAAGAGCAATCAAGACTTTGCCAAGGAGATTTCA
CTCAATATGTCTGCACTTTTAGGGGGTGAGTAG

Protein sequence : 
MLLEINHLEKVYRTRFSKEETRALQDVDFKVEEGEFIAIMGESGSGKTTLLNILATLDKPTRGSVILNNQDITKIKESKL
ADFRLRNLGFVFQDFNLLDTLSIQDNIFLPLVLARESYQEMEKRLEVLAPKLRIQDLLKKRPFELSGGQKQRVAIARSLI
TQPQIVLADEPTAALDYRNSEDLLNLFEEINRDGQTILMVTHSANAASHAKRVLFIKDGRIFHQLYKADKSNQDFAKEIS
LNMSALLGGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSU98_0894 YP_001200452.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-41 47
SSU98_0894 YP_001200452.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-38 45
SSU98_0894 YP_001200452.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 8e-39 42