Gene Information

Name : SSU98_0651 (SSU98_0651)
Accession : YP_001200209.1
Strain : Streptococcus suis 98HAH33
Genome accession: NC_009443
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophores ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 632146 - 632931 bp
Length : 786 bp
Strand : -
Note : -

DNA sequence : 
GTGTCTTCGATTCAAGCGGAAAATATCCAAGTCTCTTACGACAATCGGATTATTATTGATGAATTATCAACAAGTATTCC
AAAAGGAAGTATAACGACAATCATTGGTGCCAATGGCTGTGGAAAATCGACCTTGCTTAAGGCGTTGACAAGGATTATTC
CTGTTCAAGAAGGGGCTATCTATCTAGATGGACAAGCCATTTCACAACTGCCAACCAAAGAAGTTGCAAAAAAATTGGCC
CTGCTCCCTCAGGTCTTAGAAGCGACAGAAGGGATTTCCGTTTATGAACTGGTCTCCTATGGTCGCTTTCCGCATCAAAA
TGGGCTGGGACATCTCACTGATCAGGATAGAGAGAAAATCAACTGGGCCTTGGAAGTCACCCGGACCGCTCCCTACGCTA
GGTTACCAGTTGATGATTTATCAGGTGGTCAGAGGCAACGGGTTTGGATTGCGATGGCACTTGCCCAAGATACGGATACC
ATTTTCTTAGATGAACCAACAACCTATCTTGATCTCAATCATCAATTGGAAGTCTTAGAACTTTTAAAAGAACTGAATCA
AAGCCGACAGAAAACCATTGTGATGGTCCTTCACGATGTCAATTTATCAGCTCGATTTTCAGATTATATGATTGCCATGA
AAGAGGGAGATATTCGCTACCATGGATCTGTGTCCAATATGATGACAACTGAGATACTTAGGGACATTTTTAGCATTGAA
CCTCAATTGATGCAGGTTGCTGGTCAAGATTACCCTATTTTGCTAACTTACGATTTAAAAAAATAA

Protein sequence : 
MSSIQAENIQVSYDNRIIIDELSTSIPKGSITTIIGANGCGKSTLLKALTRIIPVQEGAIYLDGQAISQLPTKEVAKKLA
LLPQVLEATEGISVYELVSYGRFPHQNGLGHLTDQDREKINWALEVTRTAPYARLPVDDLSGGQRQRVWIAMALAQDTDT
IFLDEPTTYLDLNHQLEVLELLKELNQSRQKTIVMVLHDVNLSARFSDYMIAMKEGDIRYHGSVSNMMTTEILRDIFSIE
PQLMQVAGQDYPILLTYDLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-53 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-53 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-53 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-53 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-53 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-51 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-51 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-49 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSU98_0651 YP_001200209.1 cobalamin/Fe3+-siderophores ABC transporter ATPase BAC0164 Protein 4e-49 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSU98_0651 YP_001200209.1 cobalamin/Fe3+-siderophores ABC transporter ATPase VFG1042 Protein 4e-49 43