Gene Information

Name : SSU98_0468 (SSU98_0468)
Accession : YP_001200026.1
Strain : Streptococcus suis 98HAH33
Genome accession: NC_009443
Putative virulence/resistance : Unknown
Product : sortase (surface protein transpeptidase)
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3764
EC number : -
Position : 463758 - 464603 bp
Length : 846 bp
Strand : +
Note : -

DNA sequence : 
GTGCAAAAGCAAGAGTGGAAGTATTTCCGAAGATATTTCTTTGGTCTTAACACAAGGAAAGGAGGGGATTTCATGATCAA
ATGGCTCAAAAAGAAAGGTCCGTCTTTTATCATGCCATTAATTTTTATATTGGGGATTGGACTATTGGCTTATCCATCGG
TCAGTGATTACTGGAATTCCTTCCACCAATCAGAGGCCATCATGTCCTATTCTGACACAGTATCAGATATGACAGCTGAC
CAATACAAAGAAATCATTGATAGTGCGCGCCAGTATAATCAAGAAAAACCCTTAAACTGGAATGTGACTGCATCCGACAT
TGAAGCCTACAATCAGGAATTGAATTTCAATAAAGATGGCATCATGGGCTATATTGAGATTCCTAAAATTGATGTCAAGT
TATCTATATTTCATGGGACAGACGAAACGGTTTTAGAGACTTCTATTGGACATCTAGAAGGAACATCGTTGCCTGTAGGA
GGTTTGGGAACTCATAGTGTACTTTCAGGGCATCGTGGGCTCCCATCTGCCCGTCTGTTTTCTGATTTAGATAAGTTGAG
AGAAGGCGATATATTTACCATTCACGTTCTCAATGAAACACTAACTTACAAAGTGGACCAGATTCGAGTGGTTGAGCCAT
CAGCTTTATCGGCTCTTACCATGGAACCTCAGAAAGACTTATTGACTTTGGTAACCTGTACACCCTACGGTATTAATACA
CATAGGCTATTAGTTCGTGGCTATCGTATTGAAAATGTTAATGGTAGTGCTTTGGTTACCTCTGATGCTATCCAAATTAA
AGCAATTTTTATTGCTCCATTTATCGCAACTCCAATTCTATTTTAA

Protein sequence : 
MQKQEWKYFRRYFFGLNTRKGGDFMIKWLKKKGPSFIMPLIFILGIGLLAYPSVSDYWNSFHQSEAIMSYSDTVSDMTAD
QYKEIIDSARQYNQEKPLNWNVTASDIEAYNQELNFNKDGIMGYIEIPKIDVKLSIFHGTDETVLETSIGHLEGTSLPVG
GLGTHSVLSGHRGLPSARLFSDLDKLREGDIFTIHVLNETLTYKVDQIRVVEPSALSALTMEPQKDLLTLVTCTPYGINT
HRLLVRGYRIENVNGSALVTSDAIQIKAIFIAPFIATPILF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 8e-41 44
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-42 43
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-36 41