Gene Information

Name : SSU98_0305 (SSU98_0305)
Accession : YP_001199863.1
Strain : Streptococcus suis 98HAH33
Genome accession: NC_009443
Putative virulence/resistance : Resistance
Product : cation transport ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 299762 - 301663 bp
Length : 1902 bp
Strand : -
Note : -

DNA sequence :
ATGATAATAATTTTAAATAAGGAAGAGCCAACTATGACACTCGTAACCAACCTCAAACAACACAGCCACATCATCACGAC
CGCTCTTTGCTTGGCGCTCATTCTAATAGGTATCCTTCTGTTTCAGACTGGACAGGGATGGGCTCCTATCCTCTTCATTT
CAGCCTTTGTCATCGGGGGCTACCAATCAGCCAAGGAAGGCATTTCTGAGCTGATTTTCGACAAGCACCTGTCTGTCGAC
CTGCTCATGATTTTAGCTGCTATCGGCTCTGGTCTAATTGGCTACTGGATGGAGGGGGCTCTACTCATCTTCATCTTCTC
CCTTTCTTCTACTCTGGAAGAATTAGCCATGAAAAAAAGCAAGAATGCGATCGCTGCTTTGATGAACATGACCCCTCCAA
CAGCTCGCAAAATCGAGGAAAATGGTGACATTACTGTCTTAGACACCGCAGCCATCCGCATTGGCGACCTCCTGCAAGTC
CGCAAGGGTGACACGGTTCCACTGGATGCTACCCTCATCAGTCCGCAATCCATCTTTGACGAATCCATGATTACAGGCGA
GCCGCTCCCTGCGGAGAAAATGGCTGGCGATGCTGTTATCGGCGGAACCATTAACCAAGGTCCAACTGTGACCGTACAAG
TTACGGCTGAAAAAGGCGATGCCCTCTTCGATAAAATCGTCCAGATGGTTGAAAACGCCCAAGAATCCAAATCAAAAACA
GCGACTTTCATTGAAAATATGGAAGATACCTATGTCAAGGTTGTCTTGGTGGTGGTACCACTCTTCATCCTCCTTGCTCA
TTTTGCACTGGGCTGGGACTGGTTAACTGCCTTCTACCGAGGCATGATTCTCTTAACCATCGCTTCTCCTTGTGCCCTCG
TAGCTTCTTCTTCACCCGCAACACTTTCTGCCATCAGCCGTGCGGCACGTAAGGGCATGATTATCAAGGGCGGTGACATT
GCGGACAACATCGCCAATCTAGAGGCCATCGTCTTTGATAAGACGGGTACCCTGACCATTGGTAAACCTGAAGTTGTAGG
TGCGACCTATCTTGGCGATGAAGAGCTTATCAAGCAGGTTGTTCAGGCAGTTGAAAAACAATCAAGCCACCCAATCGCTC
AGGCTCTCATGACCTATACGGCTGACAGCTCTGCTATTGCCCTTCAAAGCCTAGAAGACGTGACAGGAAAAGGCTTGGTG
GCAGGCTATGAGGGCGACAGCTGGAAAATCGGTAAGGCGGGATTTGTGGCGGACAGCCTGGTGAGTCCCCTGTCTGCTGG
CTTGCTGGCACAGATCGATGAGGCGGAAAGCACTGGGAAAACCCTGGTCTATGTCAGCCAAAATGATGTGCTGGTGGCGA
TCTTCATGGTGGAAGATAGTTTGAAACCTGAGAGCAAGCAGCTGATTGCCCAGTTGAAAGAAATGGGCGTGACGCCAATT
CTCTTGACGGGTGACCAAGAAAAGACGGCTCGTTACGTGGCGAGTCAGGTCGGTATTGACCGTGTGATTGCCAACTGTCT
GCCGACGGATAAGGCTGCTGTTATCCAAGAATTACAAACCGAGTTTGCGTCTGTCGGCATGGTCGGAGACGGCATCAACG
ACGCTCCCGCCCTGGCTCAAGCCAATGTCAGCTATGCTATGGGAAGCGGAACGGACATCGCTATGGAGTCAGCTGACATC
GTACTCATGGAAGACCTGACGAGAATTCCTTACTCCATTCGTCTCTCTAAGAAAATGCGGGGCATCATCAAGCAGAACAT
CATCTTTGCGCTATCTGTCATTGCCCTTCTTATCATCTCCAACCTCTTCCAGTCTATCAACCTCCCACTCGGTGTGGTGG
GCCACGAAGGATCAACGATTTTGGTGATTTTGAATGGGTTGAGACTATTGTATTTTAAATAG

Protein sequence :
MIIILNKEEPTMTLVTNLKQHSHIITTALCLALILIGILLFQTGQGWAPILFISAFVIGGYQSAKEGISELIFDKHLSVD
LLMILAAIGSGLIGYWMEGALLIFIFSLSSTLEELAMKKSKNAIAALMNMTPPTARKIEENGDITVLDTAAIRIGDLLQV
RKGDTVPLDATLISPQSIFDESMITGEPLPAEKMAGDAVIGGTINQGPTVTVQVTAEKGDALFDKIVQMVENAQESKSKT
ATFIENMEDTYVKVVLVVVPLFILLAHFALGWDWLTAFYRGMILLTIASPCALVASSSPATLSAISRAARKGMIIKGGDI
ADNIANLEAIVFDKTGTLTIGKPEVVGATYLGDEELIKQVVQAVEKQSSHPIAQALMTYTADSSAIALQSLEDVTGKGLV
AGYEGDSWKIGKAGFVADSLVSPLSAGLLAQIDEAESTGKTLVYVSQNDVLVAIFMVEDSLKPESKQLIAQLKEMGVTPI
LLTGDQEKTARYVASQVGIDRVIANCLPTDKAAVIQELQTEFASVGMVGDGINDAPALAQANVSYAMGSGTDIAMESADI
VLMEDLTRIPYSIRLSKKMRGIIKQNIIFALSVIALLIISNLFQSINLPLGVVGHEGSTILVILNGLRLLYFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA YP_005732869.1 cadmium-translocating P-type ATPase Not tested Type-V SCCmec Protein 2e-90 42
SE0062 NP_763617.1 copper-transporting ATPase copA Not tested SCCpbp4 Protein 2e-90 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSU98_0305 YP_001199863.1 cation transport ATPase BAC0092 Protein 2e-99 42